RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 EME2A4GXA9 379 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-201ENST00000261646 MEI4A8MW99 385 aa16.93■□□□□ 0.3
SREBF1-201ENST00000261646 SPAG6O75602 509 aa16.93■□□□□ 0.3
SREBF1-201ENST00000261646 TAC1P20366 129 aa16.93■□□□□ 0.3
SREBF1-201ENST00000261646 SDC4P31431 198 aa16.93■□□□□ 0.3
SREBF1-201ENST00000261646 CDK16Q00536 496 aa16.93■□□□□ 0.3
SREBF1-201ENST00000261646 OTUD4Q01804 1114 aaKnown RBP16.93■□□□□ 0.3
SREBF1-201ENST00000261646 BMPR2Q13873 1038 aa16.93■□□□□ 0.3
SREBF1-201ENST00000261646 PTK6Q13882 451 aa16.93■□□□□ 0.3
SREBF1-201ENST00000261646 PDK4Q16654 411 aa16.93■□□□□ 0.3
SREBF1-201ENST00000261646 CWF19L1Q69YN2 538 aaKnown RBP16.93■□□□□ 0.3
SREBF1-201ENST00000261646 ACTL9Q8TC94 416 aa16.93■□□□□ 0.3
SREBF1-201ENST00000261646 TRAPPC9Q96Q05 1148 aa16.93■□□□□ 0.3
SREBF1-201ENST00000261646 RAVER2Q9HCJ3 691 aaKnown RBP16.93■□□□□ 0.3
SREBF1-201ENST00000261646 TOPORSQ9NS56 1045 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-201ENST00000261646 M0QYV0 167 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 ZBTB39O15060 712 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 ECE2O60344 883 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 NPR1P16066 1061 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 TAP1Q03518 808 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 EFTUD2Q15029 972 aaKnown RBP eCLIP16.92■□□□□ 0.32e-7■■■■□ 22.1
SREBF1-201ENST00000261646 ETNPPLQ8TBG4 499 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 ZNF668Q96K58 619 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-201ENST00000261646 LRMDAQ9H2I8 198 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 DNPEPQ9ULA0 475 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 SLC12A4Q9UP95 1085 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 MYH10P35580 1976 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 PGM3O95394 542 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 KRT76Q01546 638 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 SLC12A1Q13621 1099 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 ASTE1Q2TB18 679 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-201ENST00000261646 COBLL1Q53SF7 1204 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 EXD1Q8NHP7 514 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 FAM81AQ8TBF8 368 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 KCTD10Q9H3F6 313 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 DHX35Q9H5Z1 703 aaKnown RBP16.92■□□□□ 0.3
SREBF1-201ENST00000261646 DENND2DQ9H6A0 471 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-201ENST00000261646 FBXO6Q9NRD1 293 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-201ENST00000261646 DNAJC16Q9Y2G8 782 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 PPATQ06203 517 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 POU5F1BQ06416 359 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 CYP4A22Q5TCH4 519 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 ARMC3Q5W041 872 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 DEFB107AQ8IZN7 70 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 ZNF483Q8TF39 744 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-201ENST00000261646 SIKE1Q9BRV8 207 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 POLR3FQ9H1D9 316 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-201ENST00000261646 PRR12Q9ULL5 1215 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 SOX13Q9UN79 622 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 SP100P23497 879 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-201ENST00000261646 SLC12A3P55017 1021 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 NCOA4Q13772 614 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 LDHDQ86WU2 507 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 RYBPQ8N488 228 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-201ENST00000261646 NDNQ99608 321 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 ASCC2Q9H1I8 757 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-201ENST00000261646 EBF2Q9HAK2 575 aa16.92■□□□□ 0.3
SREBF1-201ENST00000261646 CACNA1FO60840 1977 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 TCRBV7S2A1N4TA0A589 114 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 GTF2H1P32780 548 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 ABCD1P33897 745 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 ACTR2P61160 394 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 ITKQ08881 620 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 ECM1Q16610 540 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 TCHHL1Q5QJ38 904 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-201ENST00000261646 TEDDM1Q5T9Z0 273 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 GDPD5Q8WTR4 605 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 NLRP4Q96MN2 994 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 CCDC90BQ9GZT6 254 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 STRNO43815 780 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 EDF1O60869 148 aaKnown RBP16.91■□□□□ 0.3
SREBF1-201ENST00000261646 VCAM1P19320 739 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 MAP4P27816 1152 aaKnown RBP16.91■□□□□ 0.3
SREBF1-201ENST00000261646 MCL1Q07820 350 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 OTOAQ7RTW8 1153 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 EXT2Q93063 718 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 ACTL7BQ9Y614 415 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 AKAP10O43572 662 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 TPP2P29144 1249 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-201ENST00000261646 OASLQ15646 514 aaKnown RBP16.91■□□□□ 0.3
SREBF1-201ENST00000261646 TBCCQ15814 346 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 TFDP3Q5H9I0 405 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 MFSD5Q6N075 450 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 GPAT2Q6NUI2 795 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 KLC3Q6P597 504 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 MRPL1Q9BYD6 325 aaKnown RBP16.91■□□□□ 0.3
SREBF1-201ENST00000261646 BFARQ9NZS9 450 aa16.91■□□□□ 0.3
SREBF1-201ENST00000261646 SERPINB9P50453 376 aa16.9■□□□□ 0.3
SREBF1-201ENST00000261646 PPIDQ08752 370 aaKnown RBP16.9■□□□□ 0.3
SREBF1-201ENST00000261646 SV2AQ7L0J3 742 aa16.9■□□□□ 0.3
SREBF1-201ENST00000261646 ZNF677Q86XU0 584 aa16.9■□□□□ 0.3
SREBF1-201ENST00000261646 EPS8L1Q8TE68 723 aa16.9■□□□□ 0.3
SREBF1-201ENST00000261646 CATSPER2Q96P56 530 aa16.9■□□□□ 0.3
SREBF1-201ENST00000261646 ZNF317Q96PQ6 595 aaPredicted RBP16.9■□□□□ 0.3
SREBF1-201ENST00000261646 GCNAQ96QF7 691 aa16.9■□□□□ 0.3
SREBF1-201ENST00000261646 PPP1R16BQ96T49 567 aa16.9■□□□□ 0.3
SREBF1-201ENST00000261646 IKZF4Q9H2S9 585 aa16.9■□□□□ 0.3
SREBF1-201ENST00000261646 LRRC19Q9H756 370 aa16.9■□□□□ 0.3
SREBF1-201ENST00000261646 DMAP1Q9NPF5 467 aaPredicted RBP16.9■□□□□ 0.3
SREBF1-201ENST00000261646 MRPL40Q9NQ50 206 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms