RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 GSDMDP57764 484 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 PTK2Q05397 1052 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 CCDC173Q0VFZ6 552 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 MEA1Q16626 185 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 HGSNATQ68CP4 663 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 GPR65Q8IYL9 337 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 HEXIM2Q96MH2 286 aaKnown RBP16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 PPP1R9BQ96SB3 815 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 ZCWPW1Q9H0M4 648 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 FAM49BQ9NUQ9 324 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 TMLHEQ9NVH6 421 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 NOCTQ9UK39 431 aaKnown RBP16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 GTF3C4Q9UKN8 822 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 PCDHGC5Q9Y5F6 944 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 CDY1Q9Y6F8 540 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 OR6C75A6NL08 312 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 IRS1P35568 1242 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 PRKCIP41743 596 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 BPIFB4P59827 614 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 MDH1BQ5I0G3 518 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 SLC8B1Q6J4K2 584 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 FAM171BQ6P995 826 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 NOP9Q86U38 636 aaKnown RBP16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 FMNL3Q8IVF7 1028 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 GDPD5Q8WTR4 605 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 SLC20A1Q8WUM9 679 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 DDX1Q92499 740 aaKnown RBP16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 PANX2Q96RD6 677 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 CLSTN3Q9BQT9 956 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 HAUS4Q9H6D7 363 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 ENTPD7Q9NQZ7 604 aa16.81■□□□□ 0.28
CCDC90B-201ENST00000260054 RFXAPO00287 272 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 FSCN2O14926 492 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 THAP12O43422 761 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 CXCL14O95715 111 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 PLEKP08567 350 aaPredicted RBP16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 CCDC172P0C7W6 258 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 VDRP11473 427 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 CCDC130P13994 396 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 PDE6CP51160 858 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 TSPY1Q01534 308 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 KLHL30Q0D2K2 578 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 PPP1R26Q5T8A7 1209 aaPredicted RBP16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 PLPP4Q5VZY2 271 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 GLYCTKQ8IVS8 523 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 MYCBPAPQ8TBZ2 947 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 ZNF606Q8WXB4 792 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 OXCT2Q9BYC2 517 aaPredicted RBP16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 ZNF576Q9H609 170 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 RXFP1Q9HBX9 757 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 ARHGAP20Q9P2F6 1191 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 IRAK3Q9Y616 596 aa16.8■□□□□ 0.28
CCDC90B-201ENST00000260054 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 HIDE1A8MVS5 230 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 O00370 1275 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 SOX1O00570 391 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 SERPING1P05155 500 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 CFHP08603 1231 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 SSTR3P32745 418 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 OR1D2P34982 312 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 CA8P35219 290 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 ARPP19P56211 112 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 TSR1Q2NL82 804 aaKnown RBP16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 SLC39A12Q504Y0 691 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 SGO2Q562F6 1265 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 TDRD12Q587J7 1177 aaKnown RBP16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 TAF3Q5VWG9 929 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 OLIG1Q8TAK6 271 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 CYFIP2Q96F07 1278 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 PCED1BQ96HM7 432 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 CHP1Q99653 195 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 SYT11Q9BT88 431 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 ZNHIT6Q9NWK9 470 aaKnown RBP16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 KIAA1257Q9ULG3 409 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 SSX2IPQ9Y2D8 614 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 TRANK1O15050 2925 aa16.79■□□□□ 0.28
CCDC90B-201ENST00000260054 C2orf71A6NGG8 1288 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 TEX28O15482 410 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 LPXNO60711 386 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 CNPP09543 421 aaKnown RBP16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 CPB1P15086 417 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 CHRNB2P17787 502 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 FECHP22830 423 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 ROR1Q01973 937 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 SMC1AQ14683 1233 aaKnown RBP16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 ARHGAP17Q68EM7 881 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 PAQR9Q6ZVX9 377 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 DCP1BQ8IZD4 617 aaKnown RBP16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 FUKQ8N0W3 1084 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 MRPL43Q8N983 215 aaKnown RBP16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 SLC2A14Q8TDB8 520 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 MICAL1Q8TDZ2 1067 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 MYLPFQ96A32 169 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 B3GNT5Q9BYG0 378 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 DNAI2Q9GZS0 605 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 NGRNQ9NPE2 291 aaKnown RBP16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 FNIP2Q9P278 1114 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms