RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 ALDH18A1P54886 795 aaKnown RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 VCPP55072 806 aaKnown RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 BCAR1P56945 870 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 SARNPP82979 210 aaKnown RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 ROR1Q01973 937 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 PIGHQ14442 188 aaPredicted RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 CRYMQ14894 314 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 RCN1Q15293 331 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 SLC1A5Q15758 541 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 C1orf220Q5T0J3 134 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 RASIP1Q5U651 963 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 GADL1Q6ZQY3 521 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 SDCCAG8Q86SQ7 713 aaPredicted RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 SESTD1Q86VW0 696 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 LRRC6Q86X45 466 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 ARID3BQ8IVW6 561 aaPredicted RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 ZCCHC9Q8N567 271 aaKnown RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 TTC13Q8NBP0 860 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 CCNYQ8ND76 341 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 AGR3Q8TD06 166 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 PSPC1Q8WXF1 523 aaKnown RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 ZNF75CPQ92670 426 aaPredicted RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 DDX27Q96GQ7 796 aaKnown RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 ATXN7L3BQ96GX2 97 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 NAF1Q96HR8 494 aaKnown RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 ACAP3Q96P50 834 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 GBP5Q96PP8 586 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 TBC1D10AQ9BXI6 508 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 MRPL4Q9BYD3 311 aaKnown RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 ACAD9Q9H845 621 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 RPF1Q9H9Y2 349 aaKnown RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 CYP4F11Q9HBI6 524 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 AVENQ9NQS1 362 aaPredicted RBP4.98□□□□□ -1.61
USP44-201ENST00000258499 GPATCH2LQ9NWQ4 482 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 AKT3Q9Y243 479 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 RIPK3Q9Y572 518 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 UBIAD1Q9Y5Z9 338 aa4.98□□□□□ -1.61
USP44-201ENST00000258499 ECM29Q5VYK3 1845 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 TRIM49D1C9J1S8 452 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 WNT10BO00744 389 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 NDC80O14777 642 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 MED7O43513 233 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 LIASO43766 372 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 OPHN1O60890 802 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 PDGFRAP16234 1089 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 BGNP21810 368 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 SERPINB6P35237 376 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 WDR4P57081 412 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 NOMO3P69849 1222 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 ZNF200P98182 395 aaPredicted RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 BNIP1Q12981 228 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 BMPR2Q13873 1038 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 ZACNQ401N2 412 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 MROH9Q5TGP6 573 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 C1orf146Q5VVC0 180 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 FAM160B1Q5W0V3 765 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 NAIF1Q69YI7 327 aaPredicted RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 PCGF5Q86SE9 256 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 TRABD2AQ86V40 505 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 FAM228AQ86W67 206 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 NUDCD3Q8IVD9 361 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 PPIL6Q8IXY8 311 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 RTKN2Q8IZC4 609 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 NME8Q8N427 588 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 RIBC1Q8N443 379 aaPredicted RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 ARMC2Q8NEN0 867 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 DNAJC9Q8WXX5 260 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 FERMT1Q9BQL6 677 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 NIF3L1Q9GZT8 377 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 AAASQ9NRG9 546 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.97□□□□□ -1.61
USP44-201ENST00000258499 PCMTD2Q9NV79 361 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 DDX56Q9NY93 547 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 DLGAP2Q9P1A6 1054 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 STRIP2Q9ULQ0 834 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 SLC12A4Q9UP95 1085 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 C2orf71A6NGG8 1288 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 B2RBV5 119 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 CAPN9O14815 690 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 MAP3K7O43318 606 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 KIF1CO43896 1103 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 CCDC22O60826 627 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 ZC3H11AO75152 810 aaKnown RBP eCLIP4.97□□□□□ -1.61
USP44-201ENST00000258499 PRKCBP05771 671 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 MYL2P10916 166 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 PYGBP11216 843 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 P4HA1P13674 534 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 NCF2P19878 526 aaPredicted RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 SERPINB3P29508 390 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 RFC1P35251 1148 aaPredicted RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 TNFSF9P41273 254 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 HIRAP54198 1017 aaPredicted RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 NRLP54845 237 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 HADHBP55084 474 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 NCKAP1LP55160 1127 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 MORF4L2Q15014 288 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 CYP1B1Q16678 543 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 TXNRD3NBQ6F5E7 133 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 TRIM50Q86XT4 487 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 KATNAL2Q8IYT4 538 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms