RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CD101Q93033 1021 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 TSPYL2Q9H2G4 693 aaPredicted RBP20.01■□□□□ 0.79
TRIM47-201ENST00000254816 TSPAN16Q9UKR8 245 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 GIT1Q9Y2X7 761 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 A0A0U1RQF3 1178 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 A8MXQ7 604 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 MYO1FO00160 1098 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 MCM3P25205 808 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 LRPAP1P30533 357 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 PNPLA4P41247 253 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 CLCNKBP51801 687 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 GPS2Q13227 327 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 SV2CQ496J9 727 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 PPP1R26Q5T8A7 1209 aaPredicted RBP20■□□□□ 0.79
TRIM47-201ENST00000254816 TTC39CQ8N584 583 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 CPXM1Q96SM3 734 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 MRPL47Q9HD33 250 aaKnown RBP20■□□□□ 0.79
TRIM47-201ENST00000254816 PARVAQ9NVD7 372 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 GDAP2Q9NXN4 497 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 POMCP01189 267 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 SLC7A5Q01650 507 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 SMYD5Q6GMV2 418 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 MMGT1Q8N4V1 131 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 FEZF2Q8TBJ5 459 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 ACTRT1Q8TDG2 376 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 PAAF1Q9BRP4 392 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 AP1M1Q9BXS5 423 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 RSAD1Q9HA92 442 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 PAK6Q9NQU5 681 aaPredicted RBP20■□□□□ 0.79
TRIM47-201ENST00000254816 SCINQ9Y6U3 715 aa20■□□□□ 0.79
TRIM47-201ENST00000254816 TCRBV5S1A1TA0A578 114 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 CASTOR2A6NHX0 329 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 DNM1LO00429 736 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 PIK3R2O00459 728 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 ZNF623O75123 536 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 GPD2P43304 727 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 ITIH3Q06033 890 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 GOLGA7BQ2TAP0 167 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 MAP9Q49MG5 647 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 DNAJC24Q6P3W2 148 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 RTN4RL1Q86UN2 441 aaPredicted RBP19.99■□□□□ 0.79
TRIM47-201ENST00000254816 RASGEF1CQ8N431 466 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 UBL4BQ8N7F7 174 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 APPL2Q8NEU8 664 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 MCEEQ96PE7 176 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.99■□□□□ 0.796e-7■□□□□ 10.9
TRIM47-201ENST00000254816 RNF208Q9H0X6 261 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 WNT8AQ9H1J5 351 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 FAM124BQ9H5Z6 455 aaPredicted RBP19.99■□□□□ 0.79
TRIM47-201ENST00000254816 SLC38A7Q9NVC3 462 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 DMGDHQ9UI17 866 aaKnown RBP19.99■□□□□ 0.79
TRIM47-201ENST00000254816 INPP5FQ9Y2H2 1132 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 FAN1Q9Y2M0 1017 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 MIF4GDA9UHW6 222 aaKnown RBP19.99■□□□□ 0.79
TRIM47-201ENST00000254816 GOLGA8SH3BPF8 625 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 CAND2O75155 1236 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 ERBB2P04626 1255 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 PEX5P50542 639 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 RAB27AP51159 221 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 FAM193AP78312 1265 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 CCNI2Q6ZMN8 369 aaPredicted RBP19.99■□□□□ 0.79
TRIM47-201ENST00000254816 RNPC3Q96LT9 517 aaKnown RBP19.99■□□□□ 0.79
TRIM47-201ENST00000254816 TRAIPQ9BWF2 469 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 ADAM21Q9UKJ8 722 aa19.99■□□□□ 0.79
TRIM47-201ENST00000254816 PGRMC1O00264 195 aaKnown RBP19.98■□□□□ 0.79
TRIM47-201ENST00000254816 CCL5P13501 91 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 CTNNA1P35221 906 aaKnown RBP19.98■□□□□ 0.79
TRIM47-201ENST00000254816 GNL1P36915 607 aaPredicted RBP19.98■□□□□ 0.79
TRIM47-201ENST00000254816 CDK7P50613 346 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 CDR1P51861 262 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 LCLAT1Q6UWP7 414 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 ADAT2Q7Z6V5 191 aaKnown RBP19.98■□□□□ 0.79
TRIM47-201ENST00000254816 OSTM1Q86WC4 334 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 C3orf58Q8NDZ4 430 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 CARD9Q9H257 536 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 SNX25Q9H3E2 840 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 PLEKHA4Q9H4M7 779 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 USTQ9Y2C2 406 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 SQORQ9Y6N5 450 aa19.98■□□□□ 0.79
TRIM47-201ENST00000254816 HUS1O60921 280 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 FGGP02679 453 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 PFKMP08237 780 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 PDCLQ13371 301 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 CCDC70Q6NSX1 233 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 ADGRF2Q8IZF7 708 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 SYNCQ9H7C4 482 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 KIAA1257Q9ULG3 409 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 SCN5AQ14524 2016 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 TULP2O00295 520 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 PODXLO00592 558 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 CYB561D2O14569 222 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 PROSCO94903 275 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 UNC93AQ86WB7 457 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 TTC30AQ86WT1 665 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 ECHDC2Q86YB7 292 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 KLHL7Q8IXQ5 586 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 FAM126BQ8IXS8 530 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 LINC01599Q8WXQ3 324 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 C18orf8Q96DM3 657 aa19.97■□□□□ 0.79
TRIM47-201ENST00000254816 KRT12Q99456 494 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms