RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 AP1G2O75843 785 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 WEE1P30291 646 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 PTGER2P43116 358 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 MAPRE2Q15555 327 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 TJAP1Q5JTD0 557 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 CLEC4FQ8N1N0 589 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 EPN3Q9H201 632 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 FAM47DPA6NHR8 397 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 ICAM1P05362 532 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 CAP2P40123 477 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 CDC42EP1Q00587 391 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 TROAPQ12815 778 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 SNX17Q15036 470 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 KCTD10Q9H3F6 313 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 PAK5Q9P286 719 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 AK9Q5TCS8 1911 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 TMEM253P0C7T8 217 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 ALDH7A1P49419 539 aaKnown RBP19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 LAMC2Q13753 1193 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 LRRC23Q53EV4 343 aaPredicted RBP19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 SYDE1Q6ZW31 735 aaPredicted RBP19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 ADGRA1Q86SQ6 560 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 RSAD1Q9HA92 442 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 KLC4Q9NSK0 619 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 NFIBO00712 420 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 ZC3H11AO75152 810 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 CDH18Q13634 790 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 CNGA3Q16281 694 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 RPRD1AQ96P16 312 aaPredicted RBP19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 CPA4Q9UI42 421 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 IQSEC2Q5JU85 1478 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 STYK1Q6J9G0 422 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 BTN2A2Q8WVV5 523 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 C17orf80Q9BSJ5 609 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 UNKQ9C0B0 810 aaKnown RBP19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 PON1P27169 355 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 CTCFP49711 727 aaPredicted RBP19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 DDX39BQ13838 428 aaKnown RBP19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 COL23A1Q86Y22 540 aaPredicted RBP19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 USP38Q8NB14 1042 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 EIF2AQ9BY44 585 aaKnown RBP19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 MRPL1Q9BYD6 325 aaKnown RBP19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 CDV3Q9UKY7 258 aaKnown RBP19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 NME5P56597 212 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 ANKS1AQ92625 1134 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 DNAJB2P25686 324 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 COILP38432 576 aaPredicted RBP19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 SLITRK1Q96PX8 696 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 A0A087X0T9 212 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 DDTLA6NHG4 134 aaPredicted RBP19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 FAM228BP0C875 321 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 FUT11Q495W5 492 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 NBPF12Q5TAG4 269 aaPredicted RBP19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 KCNB2Q92953 911 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 GLT1D1Q96MS3 346 aa19.47■□□□□ 0.71
SMARCC1-201ENST00000254480 CAND2O75155 1236 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 RFX3P48380 749 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 AARS2Q5JTZ9 985 aaKnown RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 EFHC1Q5JVL4 640 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 PATL1Q86TB9 770 aaKnown RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 TSPAN17Q96FV3 270 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 PNKPQ96T60 521 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 CINPQ9BW66 212 aaPredicted RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 RANBP17Q9H2T7 1088 aaKnown RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 TIMM13Q9Y5L4 95 aaPredicted RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 PBLDP30039 288 aaPredicted RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 TFB1MQ8WVM0 346 aaKnown RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 AKT1S1Q96B36 256 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 SMG5Q9UPR3 1016 aaKnown RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 ADGRB3O60242 1522 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 LRG1P02750 347 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 SPRP35270 261 aaPredicted RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 ACADSBP45954 432 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 PLA2G4AP47712 749 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 OR9Q1Q8NGQ5 310 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 GRAMD1AQ96CP6 724 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 WNK4Q96J92 1243 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 CDYLQ9Y232 598 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 MORC2Q9Y6X9 1032 aaPredicted RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 SKAP2O75563 359 aaPredicted RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 SLC15A2Q16348 729 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 TDRD10Q5VZ19 366 aaKnown RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 ACAD10Q6JQN1 1059 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 CPS1P31327 1500 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 MAP3K7CLP57077 242 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 PRPF39Q86UA1 669 aaKnown RBP19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 FAM162AQ96A26 154 aa19.46■□□□□ 0.71
SMARCC1-201ENST00000254480 SPATA31A5Q5VU36 1347 aa19.46■□□□□ 0.7
SMARCC1-201ENST00000254480 SPATA31A7Q8IWB4 1347 aa19.46■□□□□ 0.7
SMARCC1-201ENST00000254480 GLRBP48167 497 aa19.45■□□□□ 0.7
SMARCC1-201ENST00000254480 XPO6Q96QU8 1125 aaKnown RBP19.45■□□□□ 0.7
SMARCC1-201ENST00000254480 ERP44Q9BS26 406 aa19.45■□□□□ 0.7
SMARCC1-201ENST00000254480 CRLS1Q9UJA2 301 aa19.45■□□□□ 0.7
SMARCC1-201ENST00000254480 PCDHB8Q9UN66 801 aa19.45■□□□□ 0.7
SMARCC1-201ENST00000254480 USP15Q9Y4E8 981 aaPredicted RBP19.45■□□□□ 0.7
SMARCC1-201ENST00000254480 CASTOR2A6NHX0 329 aa19.45■□□□□ 0.7
SMARCC1-201ENST00000254480 ERVK-24P63145 666 aa19.45■□□□□ 0.7
SMARCC1-201ENST00000254480 MEI1Q5TIA1 1274 aa19.45■□□□□ 0.7
SMARCC1-201ENST00000254480 TTC39BQ5VTQ0 682 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms