RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 RTKN2Q8IZC4 609 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 EXD1Q8NHP7 514 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ART4Q93070 314 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 FAM163AQ96GL9 167 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 HSD17B14Q9BPX1 270 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 NCANO14594 1321 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 DNM1LO00429 736 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 GH1P01241 217 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CA8P35219 290 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 VCPP55072 806 aaKnown RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CEP70Q8NHQ1 597 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 SEMA4DQ92854 862 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CENPTQ96BT3 561 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 HPDLQ96IR7 371 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ANLNQ9NQW6 1124 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ASCC3Q8N3C0 2202 aaKnown RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 LCA5LO95447 670 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 VIL1P09327 827 aaKnown RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 NCALDP61601 193 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 FMO1Q01740 532 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 PTK6Q13882 451 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 SLC30A9Q6PML9 568 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 GALNT4Q8N4A0 578 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 SPDYE1Q8NFV5 336 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ETNPPLQ8TBG4 499 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 USP33Q8TEY7 942 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ALKBH8Q96BT7 664 aaKnown RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 DNPEPQ9ULA0 475 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 A8MXQ7 604 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ENO3P13929 434 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 OSBPP22059 807 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 NLRP11P59045 1033 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 MRPS9P82933 396 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PIGHQ14442 188 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 GJD4Q96KN9 370 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PIH1D1Q9NWS0 290 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 RPA3P35244 121 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PRKCIP41743 596 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 DRG2P55039 364 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 IRX1P78414 480 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 EIF1ADQ8N9N8 165 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ICA1LQ8NDH6 482 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SGF29Q96ES7 293 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 APOL2Q9BQE5 337 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 OSBPL7Q9BZF2 842 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 MCM8Q9UJA3 840 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SNX3O60493 162 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 HNRNPCL1O60812 293 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 CYP1A2P05177 515 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 RPS6P62753 249 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 HABP4Q5JVS0 413 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 CES3Q6UWW8 571 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SERPINI1Q99574 410 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 THEGQ9P2T0 379 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PCYOX1Q9UHG3 505 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 CNOT7Q9UIV1 285 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 FCHO1O14526 889 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 BANF1O75531 89 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 STX1BP61266 288 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 LRRC23Q53EV4 343 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 FSCBQ5H9T9 825 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ACAD11Q709F0 780 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 IL31RAQ8NI17 732 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 TTC8Q8TAM2 541 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 NACA2Q9H009 215 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ZFATQ9P243 1243 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SAE1Q9UBE0 346 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 NOD1Q9Y239 953 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 NUB1Q9Y5A7 615 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 C4AP0C0L4 1744 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 C4BP0C0L5 1744 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 DNALI1O14645 258 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 CREB3O43889 395 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 CSDE1O75534 798 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 TAC1P20366 129 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PTGIRP43119 386 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 TAS2R40P59535 323 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ESRRGP62508 458 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 CCNG2Q16589 344 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 WDR72Q3MJ13 1102 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 TTC39BQ5VTQ0 682 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 TCP10LQ8TDR4 215 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ZNF75CPQ92670 426 aaPredicted RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PAFAH2Q99487 392 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 OLFML3Q9NRN5 406 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 FBXO40Q9UH90 709 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ZNF711Q9Y462 761 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 FRMPD4Q14CM0 1322 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PIK3CDO00329 1044 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SH3BP5O60239 455 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ATP6V1B1P15313 513 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 SERPINB3P29508 390 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ABCG1P45844 678 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 PKN2Q16513 984 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 TTC27Q6P3X3 843 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 MKL1Q969V6 931 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 E2F7Q96AV8 911 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 ADCY3O60266 1144 aa4.82□□□□□ -1.64
VPS13C-201ENST00000249837 EEF1B2P24534 225 aaKnown RBP4.82□□□□□ -1.64
VPS13C-201ENST00000249837 CYTH1Q15438 398 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms