RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 DEFB107AQ8IZN7 70 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 CAPSLQ8WWF8 208 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 SAE1Q9UBE0 346 aaPredicted RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 LRFN2Q9ULH4 789 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 POU1F1P28069 291 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 MRPS35P82673 323 aaKnown RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 AGBL1Q96MI9 1066 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 NDEL1Q9GZM8 345 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 PLEKHA5Q9HAU0 1116 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 GPAT2Q6NUI2 795 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 RNF149Q8NC42 400 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 MIEF2Q96C03 454 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 CLIC5Q9NZA1 410 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 XPOTO43592 962 aaKnown RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 RPA3P35244 121 aaPredicted RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 USP11P51784 963 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 EFHC2Q5JST6 749 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 PCNX4Q63HM2 1172 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 ARHGEF19Q8IW93 802 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 KLHL4Q9C0H6 718 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 FLT1P17948 1338 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 RCCD1A6NED2 376 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 FNTAP49354 379 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 GIMAP8Q8ND71 665 aaPredicted RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 TMC2Q8TDI7 906 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 COPS7BQ9H9Q2 264 aaPredicted RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 TRIM16O95361 564 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 PAMP19021 973 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 STXBP2Q15833 593 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 CTSHP09668 335 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 MAPK7Q13164 816 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 CDKL3Q8IVW4 592 aaPredicted RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 ARHGEF26Q96DR7 871 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 MAGEB18Q96M61 343 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 PCP4L1A6NKN8 68 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 RAG1P15918 1043 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 FSTL1Q12841 308 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 KCTD2Q14681 263 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 UBASH3BQ8TF42 649 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 SH3GL2Q99962 352 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 KIAA1683Q9H0B3 1180 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 IKZF4Q9H2S9 585 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 DDX56Q9NY93 547 aaKnown RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 PI4KBQ9UBF8 816 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 KAT6AQ92794 2004 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 TJAP1Q5JTD0 557 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 IQSEC1Q6DN90 963 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 ZNF467Q7Z7K2 595 aaPredicted RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 ZNF669Q96BR6 464 aaPredicted RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 TLR2O60603 784 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 ENTPD5O75356 428 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 CBWD1Q9BRT8 395 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 KATNAL1Q9BW62 490 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 MYO3AQ8NEV4 1616 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 PFDN6O15212 129 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 LZTS3O60299 673 aaPredicted RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 ANXA13P27216 316 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 ATP6V1E1P36543 226 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 KPNA2P52292 529 aaKnown RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 ARL13BQ3SXY8 428 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 TATDN2Q93075 761 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 ABCG8Q9H221 673 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 KCTD10Q9H3F6 313 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 ASCC3Q8N3C0 2202 aaKnown RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 SPDYE5A6NIY4 337 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 EYA4O95677 639 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 SARSP49591 514 aaKnown RBP7.83□□□□□ -1.16
RIF1-201ENST00000243326 SPDYE7PQ495Y7 208 aa7.83□□□□□ -1.16
RIF1-201ENST00000243326 WTIPA6NIX2 430 aaPredicted RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 RARBP10826 455 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 ZNF23P17027 643 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 TSPAN8P19075 237 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 SLC5A5Q92911 643 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 BATF3Q9NR55 127 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 CHCHD3Q9NX63 227 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 NLRP1Q9C000 1473 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 HMOX2P30519 316 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 RFX3P48380 749 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 LDLRAP1Q5SW96 308 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 POLNQ7Z5Q5 900 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 BFARQ9NZS9 450 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 UBAP2LQ14157 1087 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 OTUD3Q5T2D3 398 aaPredicted RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 EXD1Q8NHP7 514 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 PRKAB1Q9Y478 270 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 H0YC42 278 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 PMPCBO75439 489 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 FKBP9O95302 570 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 P4HBP07237 508 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 SNRPAP09012 282 aaKnown RBP7.82□□□□□ -1.16
RIF1-201ENST00000243326 CHKAP35790 457 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 MARCKSL1P49006 195 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 CENPAP49450 140 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 KIAA1841Q6NSI8 718 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 RNF19BQ6ZMZ0 732 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 FKBP9P1Q75LS8 142 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 ETAA1Q9NY74 926 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 DDX3XO00571 662 aaKnown RBP eCLIP7.82□□□□□ -1.162e-13■■□□□ 11.4
RIF1-201ENST00000243326 TBC1D4O60343 1298 aa7.82□□□□□ -1.16
RIF1-201ENST00000243326 PSMC3P17980 439 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms