RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 UNC5CO95185 931 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 CA4P22748 312 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 NPTX2P47972 431 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 NOGQ13253 232 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 SLC35G2Q8TBE7 412 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 AIPL1Q9NZN9 384 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 COMMD3-BMI1R4GMX3 469 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 ROBO3Q96MS0 1386 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 ZBED1O96006 694 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 MOCS2O96007 188 aaPredicted RBP11.5□□□□□ -0.57
COPA-201ENST00000241704 RARAP10276 462 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 CYP2C8P10632 490 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 SERPINB6P35237 376 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 SKIV2L2P42285 1042 aaKnown RBP11.5□□□□□ -0.57
COPA-201ENST00000241704 KRT17Q04695 432 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 KCNMA1Q12791 1236 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 MYBPC2Q14324 1141 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 BTBD8Q5XKL5 378 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 PDIK1LQ8N165 341 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 SCG3Q8WXD2 468 aaKnown RBP11.5□□□□□ -0.57
COPA-201ENST00000241704 RNF25Q96BH1 459 aaPredicted RBP11.5□□□□□ -0.57
COPA-201ENST00000241704 AAASQ9NRG9 546 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 TRAF3IP3Q9Y228 551 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 IL18RAPO95256 599 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 APOEP02649 317 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 RAG1P15918 1043 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 SLC1A1P43005 524 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 CASP4P49662 377 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 LONRF1Q17RB8 773 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 TRMT10CQ7L0Y3 403 aaKnown RBP11.5□□□□□ -0.57
COPA-201ENST00000241704 ARMCX6Q7L4S7 300 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 SPATA2LQ8IUW3 424 aaPredicted RBP11.5□□□□□ -0.57
COPA-201ENST00000241704 EPS8L3Q8TE67 593 aaKnown RBP11.5□□□□□ -0.57
COPA-201ENST00000241704 RMDN2Q96LZ7 410 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 FAM161BQ96MY7 647 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 P2RX7Q99572 595 aaKnown RBP11.5□□□□□ -0.57
COPA-201ENST00000241704 SLC38A7Q9NVC3 462 aa11.5□□□□□ -0.57
COPA-201ENST00000241704 MEIS2O14770 477 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 TGFB3P10600 412 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 PTPRAP18433 802 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 NAMPTP43490 491 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 PMS1P54277 932 aaKnown RBP11.49□□□□□ -0.57
COPA-201ENST00000241704 NR1H3Q13133 447 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 TMEM132DQ14C87 1099 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 RASSF3Q86WH2 238 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 MAML3Q96JK9 1138 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 DNAAF2Q9NVR5 837 aaKnown RBP11.49□□□□□ -0.57
COPA-201ENST00000241704 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
COPA-201ENST00000241704 LRRC37A3O60309 1634 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 AFDNP55196 1824 aaKnown RBP11.49□□□□□ -0.57
COPA-201ENST00000241704 SETD1AO15047 1707 aaKnown RBP11.49□□□□□ -0.57
COPA-201ENST00000241704 TMEM253P0C7T8 217 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 PON1P27169 355 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 BNIP1Q12981 228 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 MED15Q96RN5 788 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 SPON2Q9BUD6 331 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 TRIM55Q9BYV6 548 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 ASCC2Q9H1I8 757 aaPredicted RBP11.49□□□□□ -0.57
COPA-201ENST00000241704 MOSPD1Q9UJG1 213 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 PCDHB7Q9Y5E2 793 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 CFAP69A5D8W1 941 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 PIK3CDO00329 1044 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 ATXN8OSP0DMR3 200 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 SLURP2P0DP57 97 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 RALAP11233 206 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 GARTP22102 1010 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 ALDH7A1P49419 539 aaKnown RBP11.49□□□□□ -0.57
COPA-201ENST00000241704 RARRES1P49788 294 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 IFI35P80217 286 aaPredicted RBP11.49□□□□□ -0.57
COPA-201ENST00000241704 PDE1BQ01064 536 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 NOTUMQ6P988 496 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 SLC30A10Q6XR72 485 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 INPP5DQ92835 1189 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 HMX1Q9NP08 348 aaPredicted RBP11.49□□□□□ -0.57
COPA-201ENST00000241704 KCNMB3Q9NPA1 279 aa11.49□□□□□ -0.57
COPA-201ENST00000241704 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.49□□□□□ -0.57
COPA-201ENST00000241704 A0A0G2JND7 137 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 AKAP3O75969 853 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SCNN1BP51168 640 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 NOP14P78316 857 aaKnown RBP11.48□□□□□ -0.57
COPA-201ENST00000241704 DSG1Q02413 1049 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 CENPUQ71F23 418 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 PIGWQ7Z7B1 504 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 JAMLQ86YT9 394 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 TRIM59Q8IWR1 403 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SH3TC2Q8TF17 1288 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SCYL1Q96KG9 808 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 MAGEB18Q96M61 343 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 ROBO1Q9Y6N7 1651 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 CYP3A7-CYP3A51PA0A087WV96 503 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SUPT3HO75486 399 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 MAPTP10636 758 aaKnown RBP11.48□□□□□ -0.57
COPA-201ENST00000241704 CYP3A7P24462 503 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 GRIK1P39086 918 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SLC26A2P50443 739 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 SLC34A1Q06495 639 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 TRADDQ15628 312 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 PARP6Q2NL67 630 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 RGMBQ6NW40 437 aa11.48□□□□□ -0.57
COPA-201ENST00000241704 APPL2Q8NEU8 664 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms