RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 DEFA3P59666 94 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 AASDHQ4L235 1098 aaPredicted RBP13.74□□□□□ -0.21
NEK9-201ENST00000238616 GLMNQ92990 594 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 SIKE1Q9BRV8 207 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 PCDHA10Q9Y5I2 948 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 C16orf96A6NNT2 1141 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 AP3B1O00203 1094 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 RSPH9Q9H1X1 276 aaPredicted RBP13.74□□□□□ -0.21
NEK9-201ENST00000238616 INTS13Q9NVM9 706 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 CHURC1-FNTBB4DL54 471 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 PDGFRAP16234 1089 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 ZNF200P98182 395 aaPredicted RBP13.74□□□□□ -0.21
NEK9-201ENST00000238616 CNGA2Q16280 664 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 PIGBQ92521 554 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 HPS3Q969F9 1004 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 CALR3Q96L12 384 aaKnown RBP13.74□□□□□ -0.21
NEK9-201ENST00000238616 CIPCQ9C0C6 399 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 TMEM117Q9H0C3 514 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 MIEF1Q9NQG6 463 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 NMRK1Q9NWW6 199 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 SATB2Q9UPW6 733 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 SERPINB1P30740 379 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 RBP5P82980 135 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 RBBP4Q09028 425 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 DEFB128Q7Z7B8 93 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 HEATR4Q86WZ0 1026 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 LEMD2Q8NC56 503 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 TRABDQ9H4I3 376 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 SLC38A7Q9NVC3 462 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 CELF2O95319 508 aaKnown RBP13.74□□□□□ -0.21
NEK9-201ENST00000238616 NARS2Q96I59 477 aaKnown RBP13.74□□□□□ -0.21
NEK9-201ENST00000238616 MINPP1Q9UNW1 487 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 IPPQ9Y573 584 aa13.74□□□□□ -0.21
NEK9-201ENST00000238616 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.73□□□□□ -0.21
NEK9-201ENST00000238616 ZNF185O15231 689 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 ZNF177Q13360 481 aaPredicted RBP13.73□□□□□ -0.21
NEK9-201ENST00000238616 TTC39CQ8N584 583 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 TRPC4APQ8TEL6 797 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 CCT7Q99832 543 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 PP2D1A8MPX8 630 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 CD4P01730 458 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 HLA-DQA2P01906 255 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 CKMP06732 381 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 SYBUQ9NX95 663 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 NPTXRO95502 500 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 POLBP06746 335 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 COX10Q12887 443 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 SPHKAPQ2M3C7 1700 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 TAF13Q15543 124 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 GLRA4Q5JXX5 417 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 SREBF2Q12772 1141 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 TTC39BQ5VTQ0 682 aaPredicted RBP13.73□□□□□ -0.21
NEK9-201ENST00000238616 LONP2Q86WA8 852 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 MICU2Q8IYU8 434 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 MGAT4DA6NG13 374 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 ALBP02768 609 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 ATP6V1B1P15313 513 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 SERPINB5P36952 375 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 SCARA3Q6AZY7 606 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 PLA2G4CQ9UP65 541 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 MYH7BA7E2Y1 1941 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 CHUKO15111 745 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 PFKFB3Q16875 520 aaPredicted RBP13.73□□□□□ -0.21
NEK9-201ENST00000238616 C19orf18Q8NEA5 215 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 SLC35G2Q8TBE7 412 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 TFB1MQ8WVM0 346 aaKnown RBP13.73□□□□□ -0.21
NEK9-201ENST00000238616 SLC9A8Q9Y2E8 581 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
NEK9-201ENST00000238616 LRRC14BA6NHZ5 514 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 MAP3K6O95382 1288 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 FAM200BP0CF97 657 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 CCNG1P51959 295 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 STX3Q13277 289 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 MROH9Q5TGP6 573 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 PARP9Q8IXQ6 854 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 FGFR2P21802 821 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 PDIA6Q15084 440 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 RCOR2Q8IZ40 523 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 CENPLQ8N0S6 344 aaPredicted RBP13.72□□□□□ -0.21
NEK9-201ENST00000238616 SPIRE2Q8WWL2 714 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 PI4K2AQ9BTU6 479 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 PHACTR1Q9C0D0 580 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 LNPEPQ9UIQ6 1025 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 ADAM21Q9UKJ8 722 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 PAIP2BQ9ULR5 123 aaKnown RBP13.72□□□□□ -0.21
NEK9-201ENST00000238616 CPDO75976 1380 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 MAPKAPK2P49137 400 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 CCR4P51679 360 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 STX4Q12846 297 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 PIGHQ14442 188 aaPredicted RBP13.72□□□□□ -0.21
NEK9-201ENST00000238616 TYW3Q6IPR3 259 aaKnown RBP13.72□□□□□ -0.21
NEK9-201ENST00000238616 CYB5R4Q7L1T6 521 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 TPD52L3Q96J77 140 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 FAM20AQ96MK3 541 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 VWA5AO00534 786 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 KRT33AO76009 404 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 CPSF4O95639 269 aaKnown RBP13.72□□□□□ -0.21
NEK9-201ENST00000238616 DENND6AQ8IWF6 608 aa13.72□□□□□ -0.21
NEK9-201ENST00000238616 STAMBPL1Q96FJ0 436 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms