RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 WDR83Q9BRX9 315 aaKnown RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 VCXQ9H320 206 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 TAS2R1Q9NYW7 299 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 HERC5Q9UII4 1024 aaKnown RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 PCDHB4Q9Y5E5 795 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 TMEM191CA6NGB0 347 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 F8VP50 259 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 SNUPNO95149 360 aaKnown RBP16.31■□□□□ 0.2
DDX55-201ENST00000238146 PSMG1O95456 288 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 TMEM191BP0C7N4 346 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 GARTP22102 1010 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 ENPEPQ07075 957 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 BIRC2Q13490 618 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 FNBP1LQ5T0N5 605 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 ANKRD22Q5VYY1 191 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 RINLQ6ZS11 566 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 ATP11CQ8NB49 1132 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 SKA1Q96BD8 255 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 IFT43Q96FT9 208 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 TSSK1BQ9BXA7 367 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 ACSS3Q9H6R3 686 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 APOBEC3GQ9HC16 384 aaKnown RBP16.31■□□□□ 0.2
DDX55-201ENST00000238146 C2CD2Q9Y426 696 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 DNAJC6O75061 913 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 C4BPAP04003 597 aaKnown RBP16.31■□□□□ 0.2
DDX55-201ENST00000238146 SKIP12755 728 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 TNNI1P19237 187 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 PHBP35232 272 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 CLDN10P78369 228 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 CUL2Q13617 745 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 RBBP5Q15291 538 aaKnown RBP16.31■□□□□ 0.2
DDX55-201ENST00000238146 CWF19L1Q69YN2 538 aaKnown RBP16.31■□□□□ 0.2
DDX55-201ENST00000238146 LRRC74BQ6ZQY2 392 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 CEP120Q8N960 986 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 SNCAIPQ9Y6H5 919 aa16.31■□□□□ 0.2
DDX55-201ENST00000238146 SCN9AQ15858 1988 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 VNN1O95497 513 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 CDK16Q00536 496 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 TFDP3Q5H9I0 405 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 SCYL3Q8IZE3 742 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 SAMD3Q8N6K7 520 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 PHC3Q8NDX5 983 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 SLC35B2Q8TB61 432 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 DTX3LQ8TDB6 740 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 DCAKDQ8WVC6 231 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 CLEC4DQ8WXI8 215 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 MCUR1Q96AQ8 359 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 TMEM120AQ9BXJ8 343 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 TMX4Q9H1E5 349 aaPredicted RBP16.3■□□□□ 0.2
DDX55-201ENST00000238146 SYNCQ9H7C4 482 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 ZBTB16Q05516 673 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 LRRC38Q5VT99 294 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 TAS1R3Q7RTX0 852 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 GALNT15Q8N3T1 639 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 CPT1BQ92523 772 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 ALKBH8Q96BT7 664 aaKnown RBP16.3■□□□□ 0.2
DDX55-201ENST00000238146 BICD1Q96G01 975 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 FNBP1Q96RU3 617 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 MTO1Q9Y2Z2 717 aaKnown RBP16.3■□□□□ 0.2
DDX55-201ENST00000238146 PTPRJQ12913 1337 aa16.3■□□□□ 0.2
DDX55-201ENST00000238146 ANKRD31Q8N7Z5 1873 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 NDC80O14777 642 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 ICAM1P05362 532 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 DLDP09622 509 aaKnown RBP16.29■□□□□ 0.2
DDX55-201ENST00000238146 MMP8P22894 467 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 CDKN2BP42772 138 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 ROR2Q01974 943 aaKnown RBP16.29■□□□□ 0.2
DDX55-201ENST00000238146 OGDHQ02218 1023 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 MTM1Q13496 603 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 KLHL38Q2WGJ6 581 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 RHPN2Q8IUC4 686 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 MFN1Q8IWA4 741 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 C10orf88Q9H8K7 445 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 STX18Q9P2W9 335 aaKnown RBP16.29■□□□□ 0.2
DDX55-201ENST00000238146 SAE1Q9UBE0 346 aaPredicted RBP16.29■□□□□ 0.2
DDX55-201ENST00000238146 SCOCQ9UIL1 159 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 ANKRD33BA6NCL7 494 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 WDR64B1ANS9 1081 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 AP1G2O75843 785 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 DHRS4L1P0CG22 281 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 PTPN7P35236 360 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 PSMC4P43686 418 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 GDF10P55107 478 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 ARL4CP56559 192 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 KRT72Q14CN4 511 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 PSMD6Q15008 389 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 PCGF5Q86SE9 256 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 TTC7BQ86TV6 843 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 PPIL6Q8IXY8 311 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 NAT8LQ8N9F0 302 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 FBXO36Q8NEA4 188 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 GLIS2Q9BZE0 524 aaPredicted RBP16.29■□□□□ 0.2
DDX55-201ENST00000238146 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.29■□□□□ 0.2
DDX55-201ENST00000238146 ZNRF3Q9ULT6 936 aa16.29■□□□□ 0.2
DDX55-201ENST00000238146 C2orf71A6NGG8 1288 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms