RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SPDYE16A6NNV3 312 aaPredicted RBP17.13■□□□□ 0.33
LTBR-201ENST00000228918 MSCO60682 206 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
LTBR-201ENST00000228918 EIF4BP23588 611 aaKnown RBP17.13■□□□□ 0.33
LTBR-201ENST00000228918 PDIA2Q13087 525 aaKnown RBP17.13■□□□□ 0.33
LTBR-201ENST00000228918 PDK4Q16654 411 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 CYP4A22Q5TCH4 519 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 POLNQ7Z5Q5 900 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 ZBTB33Q86T24 672 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 ERICH1Q86X53 443 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 C4orf33Q8N1A6 199 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 DNERQ8NFT8 737 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 TFAP2BQ92481 460 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 SPOCK2Q92563 424 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 GRID1Q9ULK0 1009 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 PHTF1Q9UMS5 762 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 TRIM33Q9UPN9 1127 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 HGSO14964 777 aaPredicted RBP17.13■□□□□ 0.33
LTBR-201ENST00000228918 TOM1L1O75674 476 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 UNC5CO95185 931 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 IFNB1P01574 187 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 MOGSQ13724 837 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 EFHC2Q5JST6 749 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 TLDC1Q6P9B6 456 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 FBF1Q8TES7 1133 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 STAMBPL1Q96FJ0 436 aa17.13■□□□□ 0.33
LTBR-201ENST00000228918 L3MBTL3Q96JM7 780 aaPredicted RBP17.13■□□□□ 0.33
LTBR-201ENST00000228918 PSMC3IPQ9P2W1 217 aaPredicted RBP17.13■□□□□ 0.33
LTBR-201ENST00000228918 TYROBPO43914 113 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 MAFO75444 373 aaPredicted RBP17.12■□□□□ 0.33
LTBR-201ENST00000228918 FARP2O94887 1054 aaPredicted RBP17.12■□□□□ 0.33
LTBR-201ENST00000228918 RPA3P35244 121 aaPredicted RBP17.12■□□□□ 0.33
LTBR-201ENST00000228918 PLCB3Q01970 1234 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 CNTN2Q02246 1040 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 SLC25A11Q02978 314 aaKnown RBP17.12■□□□□ 0.33
LTBR-201ENST00000228918 SGSM1Q2NKQ1 1148 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 ACCSLQ4AC99 568 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 FAXDC2Q96IV6 333 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 MRPL4Q9BYD3 311 aaKnown RBP17.12■□□□□ 0.33
LTBR-201ENST00000228918 PHACTR1Q9C0D0 580 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 SSC5DA1L4H1 1573 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 CLUHO75153 1309 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 A8MUI8 341 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 BANF1O75531 89 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 MSH2P43246 934 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
LTBR-201ENST00000228918 YARSP54577 528 aaKnown RBP17.12■□□□□ 0.33
LTBR-201ENST00000228918 GPX6P59796 221 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 CRYMQ14894 314 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 HIF1AQ16665 826 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 DUOXA2Q1HG44 320 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 SCARA5Q6ZMJ2 495 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 PCGF5Q86SE9 256 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 PRPF31Q8WWY3 499 aaKnown RBP17.12■□□□□ 0.33
LTBR-201ENST00000228918 MYLK2Q9H1R3 596 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 SLCO1B3Q9NPD5 702 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 NRBP2Q9NSY0 501 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 EFR3BQ9Y2G0 817 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 L3MBTL1Q9Y468 752 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 ANK1P16157 1881 aa17.12■□□□□ 0.33
LTBR-201ENST00000228918 WDR90Q96KV7 1748 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 ABLIM1O14639 778 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 OGTO15294 1046 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 EDF1O60869 148 aaKnown RBP17.11■□□□□ 0.33
LTBR-201ENST00000228918 WEE2P0C1S8 567 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 CA4P22748 312 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 RXRBP28702 533 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 ASPAP45381 313 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 EFNA5P52803 228 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 OTUD4Q01804 1114 aaKnown RBP17.11■□□□□ 0.33
LTBR-201ENST00000228918 SLC1A5Q15758 541 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 PTPN20Q4JDL3 420 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 ANKMY2Q8IV38 441 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 ACTL9Q8TC94 416 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 ACO2Q99798 780 aaKnown RBP17.11■□□□□ 0.33
LTBR-201ENST00000228918 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 TXLNGQ9NUQ3 528 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 CPSF3Q9UKF6 684 aaKnown RBP17.11■□□□□ 0.33
LTBR-201ENST00000228918 STRIP2Q9ULQ0 834 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 USH1CQ9Y6N9 552 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 MGAMO43451 1857 aa17.11■□□□□ 0.33
LTBR-201ENST00000228918 A0A1W2PPM1 405 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 GOLGA8SH3BPF8 625 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 GOLGA8MH3BSY2 632 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 HOXC6P09630 235 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 PSMA2P25787 234 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 RFC1P35251 1148 aaPredicted RBP17.1■□□□□ 0.33
LTBR-201ENST00000228918 PSMC4P43686 418 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 CTCFP49711 727 aaPredicted RBP17.1■□□□□ 0.33
LTBR-201ENST00000228918 GDF10P55107 478 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 GAD2Q05329 585 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 TRPC3Q13507 836 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 ZNF699Q32M78 642 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 CDCA2Q69YH5 1023 aaPredicted RBP17.1■□□□□ 0.33
LTBR-201ENST00000228918 DENND1BQ6P3S1 775 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 LRRC8CQ8TDW0 803 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 MAK16Q9BXY0 300 aaKnown RBP17.1■□□□□ 0.33
LTBR-201ENST00000228918 HOXC10Q9NYD6 342 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 PIM2Q9P1W9 311 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 FETUBQ9UGM5 382 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms