RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CALB1P05937 261 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 ZNF286BP0CG31 522 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 NLRP11P59045 1033 aaKnown RBP26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 SNCBQ16143 134 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 DGKDQ16760 1214 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 UBAP2Q5T6F2 1119 aaKnown RBP26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 HIBCHQ6NVY1 386 aaPredicted RBP26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 PPP1R21Q6ZMI0 780 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 RBBP8NLQ8NC74 664 aaPredicted RBP26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 ATG4AQ8WYN0 398 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 ELAC2Q9BQ52 826 aaKnown RBP26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 ZNF518BQ9C0D4 1074 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 CCDC113Q9H0I3 377 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 USP15Q9Y4E8 981 aaPredicted RBP26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 VGLL3A8MV65 326 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 ZBTB42B2RXF5 422 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 SUN1O94901 812 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 KLRC2P26717 231 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 ZNF132P52740 706 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 VSTM1Q6UX27 236 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 ARHGEF18Q6ZSZ5 1173 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 CCDC91Q7Z6B0 441 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 GRAMD1AQ96CP6 724 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 TRIM7Q9C029 511 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 RNPEPQ9H4A4 650 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 UBN1Q9NPG3 1134 aa26.3■■□□□ 1.8
RUNDC3A-201ENST00000225441 TLR3O15455 904 aaKnown RBP26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 MAFO75444 373 aaPredicted RBP26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 KYNUQ16719 465 aa26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 ZPBP2Q6X784 338 aa26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 UBR7Q8N806 425 aa26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 CFAP57Q96MR6 1250 aa26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 C11orf70Q9BRQ4 267 aa26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 HERPUD2Q9BSE4 406 aa26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 MSTO1Q9BUK6 570 aa26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 IMPG2Q9BZV3 1241 aa26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 R3HDM2Q9Y2K5 976 aaKnown RBP26.29■■□□□ 1.8
RUNDC3A-201ENST00000225441 FKTNO75072 461 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 TJP3O95049 919 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 MMP8P22894 467 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 GLRA2P23416 452 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 SLC18A1P54219 525 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 SURF1Q15526 300 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 IZUMO3Q5VZ72 239 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 TMEM270Q6UE05 265 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 TDRPQ86YL5 185 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 AP5M1Q9H0R1 490 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 APOBEC3GQ9HC16 384 aaKnown RBP26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 MGRN1O60291 552 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 GNRH1P01148 92 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 RDXP35241 583 aaKnown RBP26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 TAS2R40P59535 323 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 NOP14P78316 857 aaKnown RBP26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 NFX1Q12986 1120 aaKnown RBP26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 EXOC8Q8IYI6 725 aa26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 DDX56Q9NY93 547 aaKnown RBP26.28■■□□□ 1.8
RUNDC3A-201ENST00000225441 CNTNAP2Q9UHC6 1331 aa26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 H3BRB1 525 aa26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 TRIM32Q13049 653 aa26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 SPRED3Q2MJR0 410 aa26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 ANKS1BQ7Z6G8 1248 aa26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 TMEM143Q96AN5 459 aa26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 MAGEB18Q96M61 343 aa26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 FRMD8P1Q9BZ68 369 aaPredicted RBP26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 PHACTR1Q9C0D0 580 aa26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 TUT1Q9H6E5 874 aaKnown RBP26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 NKIRAS1Q9NYS0 192 aa26.27■■□□□ 1.8
RUNDC3A-201ENST00000225441 TMEM191CA6NGB0 347 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 TMEM191BP0C7N4 346 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 BRAFP15056 766 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 SLC8A1P32418 973 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 ACOT2P49753 483 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 CPT1AP50416 773 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 CACNB2Q08289 660 aaPredicted RBP26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 RIPK1Q13546 671 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 RASA2Q15283 850 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 ZNF484Q5JVG2 852 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 ASAP3Q8TDY4 903 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 ZNF296Q8WUU4 475 aaPredicted RBP26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 HAUS2Q9NVX0 235 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 EURLQ9NYK6 297 aa26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.26■■□□□ 1.79
RUNDC3A-201ENST00000225441 DUSP11O75319 330 aaKnown RBP26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 ELNP15502 786 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 EFNA5P52803 228 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 NCOA4Q13772 614 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 WDR49Q8IV35 697 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 BRSK2Q8IWQ3 736 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 SENP1Q9P0U3 644 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 EFR3BQ9Y2G0 817 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 ARL2BPQ9Y2Y0 163 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 IGKV6-21A0A0C4DH24 114 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 DNALI1O14645 258 aaPredicted RBP26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 LIASO43766 372 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 GAS2O43903 313 aaKnown RBP26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 INSRRP14616 1297 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 IFNAR2P48551 515 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 PPARDQ03181 441 aa26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 PIGHQ14442 188 aaPredicted RBP26.25■■□□□ 1.79
RUNDC3A-201ENST00000225441 CCDC38Q502W7 563 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms