RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ZCWPW1Q9H0M4 648 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 FAM49BQ9NUQ9 324 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 GTF3C4Q9UKN8 822 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 MYO6Q9UM54 1294 aa29.01■■■□□ 2.23
CHMP4B-201ENST00000217402 MYBPHLA2RUH7 354 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 TEX28O15482 410 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 CNPP09543 421 aaKnown RBP29■■■□□ 2.23
CHMP4B-201ENST00000217402 CLCN1P35523 988 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 ADKP55263 362 aaKnown RBP29■■■□□ 2.23
CHMP4B-201ENST00000217402 CREMQ03060 361 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 SLC39A12Q504Y0 691 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 E4F1Q66K89 784 aaPredicted RBP29■■■□□ 2.23
CHMP4B-201ENST00000217402 SLC8B1Q6J4K2 584 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 LRRTM3Q86VH5 581 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 FAM161BQ96MY7 647 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 OXCT2Q9BYC2 517 aaPredicted RBP29■■■□□ 2.23
CHMP4B-201ENST00000217402 DNAI2Q9GZS0 605 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 RXFP1Q9HBX9 757 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 IRAK3Q9Y616 596 aa29■■■□□ 2.23
CHMP4B-201ENST00000217402 MFAP3LO75121 409 aa28.99■■■□□ 2.23
CHMP4B-201ENST00000217402 GRIN2CQ14957 1233 aa28.99■■■□□ 2.23
CHMP4B-201ENST00000217402 SFMBT2Q5VUG0 894 aa28.99■■■□□ 2.23
CHMP4B-201ENST00000217402 SLC47A2Q86VL8 602 aa28.99■■■□□ 2.23
CHMP4B-201ENST00000217402 CRYBG2Q8N1P7 616 aa28.99■■■□□ 2.23
CHMP4B-201ENST00000217402 TMLHEQ9NVH6 421 aa28.99■■■□□ 2.23
CHMP4B-201ENST00000217402 FNIP2Q9P278 1114 aa28.99■■■□□ 2.23
CHMP4B-201ENST00000217402 PAEPP09466 180 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 NDUFV1P49821 464 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 ROR1Q01973 937 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 PDE12Q6L8Q7 609 aaKnown RBP28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 DCP1BQ8IZD4 617 aaKnown RBP28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 PGLYRP2Q96PD5 576 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 PKMYT1Q99640 499 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 EMILIN2Q9BXX0 1053 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 AKR1B15C9JRZ8 316 aaPredicted RBP28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 CCDC130P13994 396 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 BRD2P25440 801 aaKnown RBP28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 GNA15P30679 374 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 PTK2Q05397 1052 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 ASIC2Q16515 512 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 PTPROQ16827 1216 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 MYCBPAPQ8TBZ2 947 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 KLHL5Q96PQ7 755 aa28.98■■■□□ 2.23
CHMP4B-201ENST00000217402 CYP27A1Q02318 531 aa28.97■■■□□ 2.23
CHMP4B-201ENST00000217402 HABP4Q5JVS0 413 aaKnown RBP28.97■■■□□ 2.23
CHMP4B-201ENST00000217402 FAM171BQ6P995 826 aa28.97■■■□□ 2.23
CHMP4B-201ENST00000217402 CNGA4Q8IV77 575 aa28.97■■■□□ 2.23
CHMP4B-201ENST00000217402 TFAP2BQ92481 460 aa28.97■■■□□ 2.23
CHMP4B-201ENST00000217402 MYLPFQ96A32 169 aa28.97■■■□□ 2.23
CHMP4B-201ENST00000217402 MRPL38Q96DV4 380 aaKnown RBP28.97■■■□□ 2.23
CHMP4B-201ENST00000217402 PCED1BQ96HM7 432 aa28.97■■■□□ 2.23
CHMP4B-201ENST00000217402 NUCKS1Q9H1E3 243 aaKnown RBP28.97■■■□□ 2.23
CHMP4B-201ENST00000217402 TRANK1O15050 2925 aa28.97■■■□□ 2.23
CHMP4B-201ENST00000217402 WDR27A2RRH5 827 aa28.96■■■□□ 2.23
CHMP4B-201ENST00000217402 THAP12O43422 761 aa28.96■■■□□ 2.23
CHMP4B-201ENST00000217402 FERP16591 822 aa28.96■■■□□ 2.23
CHMP4B-201ENST00000217402 SGO2Q562F6 1265 aa28.96■■■□□ 2.23
CHMP4B-201ENST00000217402 PALB2Q86YC2 1186 aa28.96■■■□□ 2.23
CHMP4B-201ENST00000217402 IMPACTQ9P2X3 320 aa28.96■■■□□ 2.23
CHMP4B-201ENST00000217402 ADH1AP07327 375 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 VDRP11473 427 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 CYP11B1P15538 503 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 KLRC2P26717 231 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 SSTR3P32745 418 aaPredicted RBP28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 PDE6CP51160 858 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 RNF19BQ6ZMZ0 732 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 ADGRD2Q7Z7M1 963 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 SLC2A14Q8TDB8 520 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 DNAJC7Q99615 494 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 ZSWIM1Q9BR11 485 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 ABHD10Q9NUJ1 306 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 AIPL1Q9NZN9 384 aa28.95■■■□□ 2.23
CHMP4B-201ENST00000217402 GOLGA6L6A8MZA4 724 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 CLDN5O00501 218 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 ADORA2BP29275 332 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 BPIFB4P59827 614 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 GPR17Q13304 367 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 MAPRE1Q15691 268 aaKnown RBP28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 PPP1R26Q5T8A7 1209 aaPredicted RBP28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 RBM23Q86U06 439 aaKnown RBP28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 FMNL3Q8IVF7 1028 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 TC2NQ8N9U0 490 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 OR8K1Q8NGG5 319 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 CYFIP2Q96F07 1278 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 MED10Q9BTT4 135 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 B3GNT5Q9BYG0 378 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 RHOBTB2Q9BYZ6 727 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 ABI2Q9NYB9 513 aaPredicted RBP28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 ATG2AQ2TAZ0 1938 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 RAB33AQ14088 237 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 TAF3Q5VWG9 929 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 SMYD5Q6GMV2 418 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 IRF2BP2Q7Z5L9 587 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 NOP9Q86U38 636 aaKnown RBP28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 SPATA2LQ8IUW3 424 aaPredicted RBP28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 EPS8L1Q8TE68 723 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 KIAA1257Q9ULG3 409 aa28.94■■■□□ 2.22
CHMP4B-201ENST00000217402 MTMR11A4FU01 709 aa28.93■■■□□ 2.22
CHMP4B-201ENST00000217402 PER2O15055 1255 aa28.93■■■□□ 2.22
CHMP4B-201ENST00000217402 CCDC172P0C7W6 258 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms