RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 PTPN11Q06124 597 aaPredicted RBP11.59□□□□□ -0.55
RGPD5-201ENST00000016946 CXCL17Q6UXB2 119 aa11.59□□□□□ -0.55
RGPD5-201ENST00000016946 FBXL5Q9UKA1 691 aa11.59□□□□□ -0.55
RGPD5-201ENST00000016946 PCDHB5Q9Y5E4 795 aa11.59□□□□□ -0.55
RGPD5-201ENST00000016946 SLC12A8A0AV02 714 aa11.59□□□□□ -0.55
RGPD5-201ENST00000016946 GYPCP04921 128 aa11.59□□□□□ -0.55
RGPD5-201ENST00000016946 POLD3Q15054 466 aaPredicted RBP11.59□□□□□ -0.55
RGPD5-201ENST00000016946 FBXO38Q6PIJ6 1188 aa11.59□□□□□ -0.55
RGPD5-201ENST00000016946 ADCK2Q7Z695 626 aa11.59□□□□□ -0.55
RGPD5-201ENST00000016946 TC2NQ8N9U0 490 aa11.59□□□□□ -0.55
RGPD5-201ENST00000016946 INTUQ9ULD6 942 aa11.59□□□□□ -0.55
RGPD5-201ENST00000016946 STX7O15400 261 aaKnown RBP11.58□□□□□ -0.55
RGPD5-201ENST00000016946 TLR2O60603 784 aa11.58□□□□□ -0.55
RGPD5-201ENST00000016946 PYGLP06737 847 aa11.58□□□□□ -0.55
RGPD5-201ENST00000016946 SENP6Q9GZR1 1112 aaPredicted RBP11.58□□□□□ -0.55
RGPD5-201ENST00000016946 TRIM45Q9H8W5 580 aaPredicted RBP11.58□□□□□ -0.55
RGPD5-201ENST00000016946 CASS4Q9NQ75 786 aa11.58□□□□□ -0.55
RGPD5-201ENST00000016946 PON1P27169 355 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 KLK7P49862 253 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 MDM2Q00987 491 aaPredicted RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 MDH1BQ5I0G3 518 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 GSPT2Q8IYD1 628 aaKnown RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 IKBKEQ14164 716 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 GPR142Q7Z601 462 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 USP13Q92995 863 aaPredicted RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 WDR24Q96S15 920 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 POP1Q99575 1024 aaKnown RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 IRX2Q9BZI1 471 aaPredicted RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 FGFR1OP2Q9NVK5 253 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 PLAGL2Q9UPG8 496 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 HPSEQ9Y251 543 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 ITSN1Q15811 1721 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 MYL4P12829 197 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 PTGER2P43116 358 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 CLNS1AP54105 237 aaKnown RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 MAGOHP61326 146 aaKnown RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 TBCCQ15814 346 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 FAM133BQ5BKY9 247 aaKnown RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 DDI1Q8WTU0 396 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 KLRG1Q96E93 195 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 TMEM176AQ96HP8 235 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 CISHQ9NSE2 258 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 DDX43Q9NXZ2 648 aaKnown RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 PCDHGB4Q9UN71 923 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 CCDC195A0A1B0GUA6 201 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 DCTN3O75935 186 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 ANXA9O76027 345 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 AKAP5P24588 427 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 BST2Q10589 180 aaKnown RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 C4orf22Q6V702 233 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 PDLIM2Q96JY6 352 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 INTS13Q9NVM9 706 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 TMEM88BA6NKF7 163 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 AKAP3O75969 853 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 ASS1P00966 412 aaKnown RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 PNMA6AP0CW24 399 aaPredicted RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 RAD9BQ6WBX8 426 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 SENP1Q9P0U3 644 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 TRIM33Q9UPN9 1127 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 L3MBTL1Q9Y468 752 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 PCDHAC2Q9Y5I4 1007 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 TIMM13Q9Y5L4 95 aaPredicted RBP11.58□□□□□ -0.56
RGPD5-201ENST00000016946 IQGAP1P46940 1657 aa11.58□□□□□ -0.56
RGPD5-201ENST00000016946 RGS4P49798 205 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 OXCT1P55809 520 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 FAM171A1Q5VUB5 890 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 MIPOL1Q8TD10 442 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 CCDC124Q96CT7 223 aaKnown RBP11.57□□□□□ -0.56
RGPD5-201ENST00000016946 WNK4Q96J92 1243 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 RMDN2Q96LZ7 410 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 ELAC2Q9BQ52 826 aaKnown RBP11.57□□□□□ -0.56
RGPD5-201ENST00000016946 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
RGPD5-201ENST00000016946 CYP11B1P15538 503 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 DDX5P17844 614 aaKnown RBP11.57□□□□□ -0.56
RGPD5-201ENST00000016946 USP10Q14694 798 aaKnown RBP11.57□□□□□ -0.56
RGPD5-201ENST00000016946 PTRHD1Q6GMV3 140 aaKnown RBP11.57□□□□□ -0.56
RGPD5-201ENST00000016946 CENPPQ6IPU0 288 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 EMILIN2Q9BXX0 1053 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 CHORDC1Q9UHD1 332 aaPredicted RBP11.57□□□□□ -0.56
RGPD5-201ENST00000016946 PKP3Q9Y446 797 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 MRFAP1Q9Y605 127 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 PRPF4O43172 522 aaKnown RBP eCLIP11.57□□□□□ -0.56
RGPD5-201ENST00000016946 RNASEH1O60930 286 aaKnown RBP11.57□□□□□ -0.56
RGPD5-201ENST00000016946 SGPL1O95470 568 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 SETSIPP0DME0 302 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 CENPCQ03188 943 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 DDIASQ8IXT1 998 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 THOC1Q96FV9 657 aaKnown RBP11.57□□□□□ -0.56
RGPD5-201ENST00000016946 CRLS1Q9UJA2 301 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 NEU2Q9Y3R4 380 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 PGK1P00558 417 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 KLRC2P26717 231 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 MTFR1Q15390 333 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 TTI2Q6NXR4 508 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 SPATA17Q96L03 361 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 TRIM51Q9BSJ1 452 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 FOXP3Q9BZS1 431 aa11.57□□□□□ -0.56
RGPD5-201ENST00000016946 CHST12Q9NRB3 414 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms