RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 ANKRD27Q96NW4 1050 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 APOBEC3GQ9HC16 384 aaKnown RBP11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 PARVAQ9NVD7 372 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 ARL8BQ9NVJ2 186 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 GABBR1Q9UBS5 961 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 IP6K2Q9UHH9 426 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 E7ENQ6 273 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 ZC3H11AO75152 810 aaKnown RBP eCLIP11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 CAP2P40123 477 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 SCNN1BP51168 640 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 NLRP11P59045 1033 aaKnown RBP11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 CUL2Q13617 745 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 RCN1Q15293 331 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 BBS9Q3SYG4 887 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 ZNF394Q53GI3 561 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 FAM182AQ5T1J6 154 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 RFX8Q6ZV50 586 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 SCYL3Q8IZE3 742 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 VPS52Q8N1B4 723 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 SYTL5Q8TDW5 730 aaPredicted RBP11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 CADM1Q9BY67 442 aaKnown RBP11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 DCLRE1BQ9H816 532 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 SLC24A2Q9UI40 661 aa11.06□□□□□ -0.64
CX3CL1-201ENST00000006053 NVLO15381 856 aaKnown RBP11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 TPD52L2O43399 206 aaKnown RBP11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 ZWINTO95229 277 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 GLRA2P23416 452 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 ERFP50548 548 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 VCPP55072 806 aaKnown RBP11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 KLC1Q07866 573 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 WDR72Q3MJ13 1102 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 LRRC23Q53EV4 343 aaPredicted RBP11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 ANKRD22Q5VYY1 191 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 C4orf50Q6ZRC1 276 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 PALM2Q8IXS6 379 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 CLEC4DQ8WXI8 215 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 MCUR1Q96AQ8 359 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 PRR11Q96HE9 360 aaPredicted RBP11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 PAFAH2Q99487 392 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 TRIM4Q9C037 500 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 FBXO6Q9NRD1 293 aaPredicted RBP11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 ANKEF1Q9NU02 776 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 AGTPBP1Q9UPW5 1226 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 ZNF536O15090 1300 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 CLUHO75153 1309 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 PTPRJQ12913 1337 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 C2orf71A6NGG8 1288 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 GYG2O15488 501 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 ZBED4O75132 1171 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 KRT36O76013 467 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 OATP04181 439 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 ACO1P21399 889 aaKnown RBP11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 ARFIP2P53365 341 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 RPS6P62753 249 aaKnown RBP11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 DGKZQ13574 1117 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 DBN1Q16643 649 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 ZACNQ401N2 412 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 SEZ6Q53EL9 994 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 NCAPG2Q86XI2 1143 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 ENDOVQ8N8Q3 282 aaKnown RBP11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 TTC17Q96AE7 1141 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 SYT15Q9BQS2 421 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 TRIM55Q9BYV6 548 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 PPP1R12CQ9BZL4 782 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 MANSC1Q9H8J5 431 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 GINM1Q9NU53 330 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 NMRK1Q9NWW6 199 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 STK32BQ9NY57 414 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 DLGAP2Q9P1A6 1054 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 KANSL3Q9P2N6 904 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 STOML1Q9UBI4 398 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 RABGEF1Q9UJ41 708 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 SYNPO2Q9UMS6 1093 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 LRRC37AA6NMS7 1700 aa11.05□□□□□ -0.64
CX3CL1-201ENST00000006053 SERPINB3P29508 390 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 PHBP35232 272 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 MAGEA8P43361 318 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 JAK3P52333 1124 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 SLC18A1P54219 525 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 MRPS35P82673 323 aaKnown RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 KPNB1Q14974 876 aaKnown RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 SMTNL2Q2TAL5 461 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 FNBP1LQ5T0N5 605 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 SYCP2LQ5T4T6 812 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 CWF19L1Q69YN2 538 aaKnown RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 DNAJC24Q6P3W2 148 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 TRIM72Q6ZMU5 477 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 MCF2L2Q86YR7 1114 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 PTPRN2Q92932 1015 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 ZBTB45Q96K62 511 aaPredicted RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 RMDN3Q96TC7 470 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 ZWILCHQ9H900 591 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 CYLDQ9NQC7 956 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 SEPT9Q9UHD8 586 aaPredicted RBP11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 A0A1B0GVG6 124 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 CCDC22O60826 627 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 VNN1O95497 513 aa11.04□□□□□ -0.64
CX3CL1-201ENST00000006053 C4BPAP04003 597 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms