RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Tgm6Q8BM11 706 aa12.89□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 StgQ8BM15 349 aa12.89□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Hdhd5Q91WM2 419 aa12.89□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 XkQ9QXY7 446 aa12.89□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Chek2Q9Z265 546 aa12.89□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Grk4O70291 574 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Hoxa2P31245 372 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 NppbP40753 121 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Fbp2P70695 339 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Gata5P97489 404 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Dact3Q0PHV7 610 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Tfcp2l1Q3UNW5 479 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Stxbp5lQ5DQR4 1185 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Nudcd3Q8R1N4 363 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Stk32bQ9JJX8 414 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 A430078G23RikE9Q7Y4 484 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Gm4758L7N258 96 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Marveld2Q3UZP0 555 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Rhox12Q4TU81 186 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Ctc1Q5SUQ9 1212 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Stxbp3Q60770 592 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Q80ZQ3 298 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Iqsec1Q8R0S2 961 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Vta1Q9CR26 309 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Sun1Q9D666 913 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Asap1Q9QWY8 1147 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Astn1Q61137 1302 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 PplQ9R269 1755 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Top3aO70157 1003 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Pcyt1aP49586 367 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Serpina1eQ00898 413 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 VcpQ01853 806 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Krt32Q62168 407 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Slc26a2Q62273 739 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Il17aQ62386 158 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Cpsf7Q8BTV2 471 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Trmt13Q8BYH3 481 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 McamQ8R2Y2 648 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Cd300ldQ8VCH2 221 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Scyl3Q9DBQ7 735 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Ing2Q9ESK4 281 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 FibpQ9JI19 357 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Tsga8Q9JJL0 238 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Cyp2j6O54750 501 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Atp6v1b2P62814 511 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Fam178bQ24JP3 464 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Glt6d1Q2NKH9 311 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Nap1l4Q78ZA7 375 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Vat1lQ80TB8 417 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Ccdc68Q8BVC4 333 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Tmc7Q8C428 726 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Bcas3Q8CCN5 928 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Trpd52l3Q9CQ14 231 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 NwcQ9CQI4 244 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Nt5c3aQ9D020 331 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 PpihQ9D868 188 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Cyp4f14Q9EP75 524 aa12.88□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Kat6bQ8BRB7 1872 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Ncam1P13595 1115 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 BrafP28028 804 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Mybl2P48972 704 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Usp10P52479 792 aaKnown RBP12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 EsrrgP62509 458 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Tom1l2Q5SRX1 507 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Arhgap28Q8BN58 729 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Osbpl2Q8BX94 484 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Stxbp5Q8K400 1152 aaKnown RBP12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Gipc1Q9Z0G0 333 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Mapk13Q9Z1B7 366 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 NuggcD3YWJ0 796 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Pias1O88907 651 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Mboat4P0C7A3 435 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Fam167bP17257 162 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Pik3r1P26450 724 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Ifit3Q64345 403 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Zpbp2Q6X786 326 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Slc17a8Q8BFU8 601 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Pop1Q8K205 1045 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Dppa5aQ9CQS7 118 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Snx10Q9CWT3 201 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Tbc1d25A1A5B6 742 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Acnat1A2AKK5 416 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Wdr95D3Z7A8 784 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Olfr247E9PVJ7 320 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Olfr819K7N727 320 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Klf6O08584 283 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Ifnb1P01575 182 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Fam193bQ3U2K0 892 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Pitpnm3Q3UHE1 974 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Lrch2Q3UMG5 773 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Trim75Q3UWZ0 467 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Mief2Q5NCS9 454 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Zcwpw1Q6IR42 630 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Eif2s1Q6ZWX6 315 aaKnown RBP12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Fbxw8Q8BIA4 598 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Rsl24d1Q99L28 163 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Cdk5rap3Q99LM2 503 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Neurl2Q9D0S4 285 aa12.87□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Olfr220E9Q050 325 aa12.86□□□□□ -0.35
Pcdh1-202ENSMUST00000159405 Npas2P97460 816 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms