RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Krt90E9Q1Z0 538 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Per1O35973 1291 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Impa1O55023 277 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Sept7O55131 436 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Rpl22P67984 128 aaKnown RBP14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Npr3P70180 536 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Arhgap45Q3TBD2 1116 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Zscan4fQ3URS2 506 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 PapolaQ61183 739 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tcf12Q61286 706 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ugt1a1Q63886 535 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Senp6Q6P7W0 1132 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Zfp341Q6PGC9 846 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Zscan4cQ80VJ6 506 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Taf2Q8C176 1104 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Fam151aQ8QZW3 608 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Wrap53Q8VC51 532 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Snapc2Q91XA5 359 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Pcdha3Q91Y16 942 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Lrp8Q924X6 996 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Psmd6Q99JI4 389 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Slc39a3Q99K24 317 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Itgb4A2A863 1818 aa14.09□□□□□ -0.15
Nup88-201ENSMUST00000035283 Arl4cP61208 192 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Npas2P97460 816 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Smcr8Q3UMB5 935 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Cyp2j11Q3UNV2 504 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Psd2Q6P1I6 770 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Arhgef18Q6P9R4 1021 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tdpoz2Q717B2 364 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Rps6kc1Q8BLK9 1056 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gpc5Q8CAL5 572 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 CntrobQ8CB62 887 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ago2Q8CJG0 860 aaKnown RBP14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Nek8Q91ZR4 698 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Polr3fQ921X6 316 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Thap12Q9CUX1 758 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Cst12Q9DAN8 128 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Hes6Q9JHE6 224 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Cntn6Q9JMB8 1028 aa14.08□□□□□ -0.15
Nup88-201ENSMUST00000035283 Dnase1l3O55070 310 aa14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 AmhP27106 555 aa14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 G3bp2P97379 482 aaKnown RBP14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tgfbrap1Q3UR70 860 aa14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 KizQ3UXL4 695 aa14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 Itga1Q3V3R4 1179 aa14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 Acap2Q6ZQK5 770 aa14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 Fam185aQ7TPD2 378 aa14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 PygbQ8CI94 843 aaKnown RBP14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 BrdtQ91Y44 956 aa14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 Nxf1Q99JX7 618 aaKnown RBP14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tnpo2Q99LG2 887 aaKnown RBP14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ssu72Q9CY97 194 aaKnown RBP14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 Pcsk1nQ9QXV0 258 aa14.08□□□□□ -0.16
Nup88-201ENSMUST00000035283 Siah3B2RWG3 268 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 DffaO54786 331 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Il3P01586 166 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 PhbP67778 272 aaKnown RBP14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 GabpaQ00422 454 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Glt6d1Q2NKH9 311 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Abi3bpQ59IW6 1179 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Eif2dQ61211 570 aaKnown RBP14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Nuak1Q641K5 658 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Arhgap20Q6IFT4 1182 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 OcrlQ6NVF0 900 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Kif11Q6P9P6 1052 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 HpseQ6YGZ1 535 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Chsy1Q6ZQ11 800 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ahcyl1Q80SW1 530 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Wdtc1Q80ZK9 677 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Adgra1Q8C4G9 578 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Abhd8Q8R0P8 439 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 MypopQ8R4U1 393 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 RnpepQ8VCT3 650 aaKnown RBP14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Hkdc1Q91W97 915 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Mrps9Q9D7N3 390 aaKnown RBP14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Sapcd2Q9D818 391 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Actrt1Q9D9J3 376 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 CsadQ9DBE0 493 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tm9sf1Q9DBU0 606 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Xpo7Q9EPK7 1087 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 MycsQ9Z304 431 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Speer3W4VSP1 261 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Clca3bE9PUL3 1044 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Vmn2r104E9Q2J5 860 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Aoc3O70423 765 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Zfp42P22227 288 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 RarbP22605 482 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Rasgrf1P27671 1262 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Nos2P29477 1144 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ptk2P34152 1090 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gpsm3Q3U1Z5 159 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Kctd8Q50H33 476 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Stxbp2Q64324 593 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ptk6Q64434 451 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Hmgb4Q6P8W9 181 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 SrlQ7TQ48 910 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Olfr1505Q7TQQ2 316 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Taf5Q8C092 801 aa14.07□□□□□ -0.16
Nup88-201ENSMUST00000035283 Zfp263Q8CF60 680 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms