RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 LzicQ8K3C3 190 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ndufaf7Q9CWG8 436 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ptk2bQ9QVP9 1009 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 FancfE9Q5Z5 343 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Gm8897L7N294 181 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Samd11Q1RNF8 542 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 AarsQ8BGQ7 968 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 RnpepQ8VCT3 650 aaKnown RBP17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Pnpla7A2AJ88 1352 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Uchl4P58321 233 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 MypopQ8R4U1 393 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Atpaf2Q91YY4 289 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Apobec3Q99J72 440 aaKnown RBP17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Eef1akmt2Q9D853 244 aa17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Rpn2Q9DBG6 631 aaKnown RBP17.29■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 4930469K13RikA0A286YDB2 92 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Rhox3cA2AWM0 215 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Rhox3hL7MU37 215 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Tex11Q14AT2 947 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Rhox3aQ4TU90 215 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 ChukQ60680 745 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Klhl28Q9CR40 571 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Dgcr8Q9EQM6 773 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Angptl2Q9R045 493 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Zyg11aA2BFL2 627 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Olfr726E9Q8X3 321 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Atp6v1b2P62814 511 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Olfr725Q05A45 321 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Plekhf1Q3TB82 279 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Fcho1Q8K285 873 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Zscan12Q9Z1D7 501 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Chek2Q9Z265 546 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Gm8922F6XVS9 199 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Klra1P20937 262 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Olfr8Q60892 310 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ripor1Q68FE6 1223 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Prpf39Q8K2Z2 665 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Plekhg6Q8R0J1 787 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Hars2Q99KK9 505 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ubiad1Q9DC60 336 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 PlekQ9JHK5 350 aaKnown RBP17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Stk4Q9JI11 487 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 RargP18911 458 aaKnown RBP17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Zfy2P20662 777 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mettl25Q6NXH8 597 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 ClmnQ8C5W0 1052 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Atp6v1b1Q91YH6 513 aa17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Habp4Q9JKS5 411 aaKnown RBP17.28■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mup10A2BIN1 180 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mup14A2CEK7 180 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mup19A9C497 187 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mup15A9R9W0 180 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mup17B5X0G2 180 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mup8E9PVW0 235 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mup7E9QA79 235 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mup6P02762 180 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mup1P11588 180 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mup2P11589 180 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 C2P21180 760 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Hsd17b4P51660 735 aaKnown RBP17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ccr1P51675 355 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 EtnpplQ8BWU8 499 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Kct2Q8K201 259 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mageb3Q9D2H4 330 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 C1qtnf1Q9QXP7 281 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Smok2bQ9QYZ3 484 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Smok2aQ9QYZ6 504 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Pou4f1P17208 421 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Cd19P25918 547 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Far2Q7TNT2 515 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ccdc77Q9CZH8 489 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Fam162aQ9D6U8 155 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Sv2aQ9JIS5 742 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Tbk1Q9WUN2 729 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Ap4b1Q9WV76 738 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Mettl1Q9Z120 268 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 RereQ80TZ9 1558 aa17.27■□□□□ 0.36
Ubfd1-201ENSMUST00000033158 Guca2bO09051 106 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Sash1P59808 1230 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Fam160a1Q505K2 1081 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Fam167aQ6P1G6 215 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 NrcamQ810U4 1256 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Chtf18Q8BIW9 969 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Nup93Q8BJ71 819 aaKnown RBP17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Snx17Q8BVL3 470 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Strip2Q8C9H6 844 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Lgi2Q8K4Z0 550 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Dcaf8Q8N7N5 591 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ndufa10Q99LC3 355 aaKnown RBP17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 CdylQ9WTK2 593 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Sept5Q9Z2Q6 369 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Lcn6A2AJB9 181 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Klc1O88447 541 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rag1P15919 1040 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 SpoplQ2M2N2 392 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Dab2ipQ3UHC7 1189 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Dnajc28Q8VCE1 385 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Igf2bp3Q9CPN8 579 aaKnown RBP17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Coro7Q9D2V7 922 aa17.27■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Trpc7Q9WVC5 862 aa17.27■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms