RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Gm45837F7D3W5 961 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tmigd3G3X8R9 209 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Stra6O70491 670 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Dync1i2O88487 612 aaKnown RBP11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Irf8P23611 424 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Sar1aP36536 198 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Pla2g6P97819 807 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gpd2Q64521 727 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Nlrp4aQ8BU40 982 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Mamdc2Q8CG85 686 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Prpsap2Q8R574 369 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Caskin2Q8VHK1 1201 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Pde2aQ922S4 916 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Atp6v0a1Q9Z1G4 839 aaKnown RBP11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gm8909G3UXE9 396 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 IapP03975 557 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Arl4aP61213 200 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ezh1P70351 747 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Creb1Q01147 341 aaKnown RBP11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Cd37Q61470 281 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 NrcamQ810U4 1256 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Nod1Q8BHB0 953 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Mical2Q8BML1 960 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Lrrc4cQ8C031 640 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 MslnlQ8C160 685 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Sept10Q8C650 452 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Snrnp27Q8K194 155 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Dennd1aQ8K382 1016 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Slc14a1Q8VHL0 384 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 MgarpQ8VI64 283 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Havcr2Q8VIM0 281 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Atp6v1b1Q91YH6 513 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Pdk2Q9JK42 407 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Unc5cO08747 931 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Impdh2P24547 514 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 RalaP63321 206 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Cog7Q3UM29 770 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 FdxrQ61578 494 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Grik5Q61626 979 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Zdhhc24Q6IR37 284 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 ErfeQ6PGN1 340 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Zswim5Q80TC6 1188 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Sh3rf3Q8C120 878 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Cyp2d26Q8CIM7 500 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Atp2a1Q8R429 994 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ndfip2Q91ZP6 311 aa11.38□□□□□ -0.59
Msh3-201ENSMUST00000022220 Zfp358E9Q8M1 571 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Pdk4O70571 412 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Sycp3P70281 254 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Mgat3Q10470 538 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rmdn3Q3UJU9 470 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rbm20Q3UQS8 1199 aaKnown RBP11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Cdkn2aipQ8BI72 563 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Dars2Q8BIP0 653 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Snx30Q8CE50 437 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Dlk2Q8K1E3 382 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Cd300ldQ8VCH2 221 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Pqbp1Q91VJ5 263 aaKnown RBP11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Twf1Q91YR1 350 aaKnown RBP11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Lpgat1Q91YX5 370 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 SmtnQ921U8 923 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Chordc1Q9D1P4 331 aaKnown RBP11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Cep72Q9D3R3 646 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gdap2Q9DBL2 498 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Sh2b2Q9JID9 621 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 B4galt5Q9JMK0 388 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tspan3Q9QY33 253 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Igf2rQ07113 2483 aaKnown RBP11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 1700031M16RikA0A087WSH0 82 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gm13084A2A8N0 494 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ace3D0G895 737 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gm28043E0CXC2 719 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Serpinb3aG3X9V8 387 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Phka1P18826 1241 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Muc1Q02496 630 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Psg29Q3URN6 468 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ppp1r13lQ5I1X5 824 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 CttnQ60598 546 aaKnown RBP11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ugt1a1Q63886 535 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gpc5Q8CAL5 572 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Fbxl13Q8CDU4 790 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Lamtor4Q8CF66 99 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rassf9Q8K342 435 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 RnpepQ8VCT3 650 aaKnown RBP11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tekt1Q9DAJ2 418 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Akr1e2Q9DCT1 301 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Atp6v1c1Q9Z1G3 382 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Myh13B1AR69 1938 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Magea10A2AMW4 325 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Krt28A6BLY7 462 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rgsl1H3BL40 1073 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Msh3P13705 1091 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Znf746Q3U133 652 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tmprss11eQ5S248 423 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Stip1Q60864 543 aaKnown RBP11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ces5aQ6AW46 575 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tmc8Q7TN58 722 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tgif2lx2Q8K5B9 231 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Coro1cQ9WUM4 474 aa11.37□□□□□ -0.59
Msh3-201ENSMUST00000022220 Wnk3Q80XP9 1757 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms