RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Tmem108Q8BHE4 574 aa18.09■□□□□ 0.49
Trim54-201ENSMUST00000013771 Leg1Q8C6C9 337 aa18.09■□□□□ 0.49
Trim54-201ENSMUST00000013771 Cog3Q8CI04 820 aa18.09■□□□□ 0.49
Trim54-201ENSMUST00000013771 Mfsd14bQ8CIA9 507 aa18.09■□□□□ 0.49
Trim54-201ENSMUST00000013771 Nmrk1Q91W63 195 aa18.09■□□□□ 0.49
Trim54-201ENSMUST00000013771 Pcdhb15Q91Y04 786 aa18.09■□□□□ 0.49
Trim54-201ENSMUST00000013771 Adgre4Q91ZE5 689 aa18.09■□□□□ 0.49
Trim54-201ENSMUST00000013771 Ribc1Q9D0B8 379 aa18.09■□□□□ 0.49
Trim54-201ENSMUST00000013771 Pak1ip1Q9DCE5 382 aaKnown RBP18.09■□□□□ 0.49
Trim54-201ENSMUST00000013771 Gm13090A2A899 111 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Vmn1r86L7N213 316 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Trappc3O55013 180 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Rpl10aP53026 217 aaKnown RBP18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Trim71Q1PSW8 855 aaKnown RBP18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Nlrp4cQ3TKR3 982 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Tbc1d31Q6NXY1 996 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Hmgb4Q6P8W9 181 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Arhgap10Q6Y5D8 786 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Olfr1105Q7TR58 312 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Spata20Q80YT5 790 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Ccdc122Q8BVN0 290 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Ttc24Q8BYG0 334 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Gm13199Q8C8E0 125 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Cacnb2Q8CC27 655 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Ifi205aQ8CGE8 404 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Sox30Q8CGW4 782 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Pcdha2Q91Y17 948 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Afg3l1Q920A7 789 aaKnown RBP18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Polr2dQ9D7M8 142 aaKnown RBP18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Phospho2Q9D9M5 241 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Nr4a3Q9QZB6 627 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 Brca2P97929 3329 aa18.08■□□□□ 0.49
Trim54-201ENSMUST00000013771 A0A1L1SQF0 893 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Dmrta2A2A9A2 531 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Olfr1023A2ASU6 311 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Speer4f2E9Q366 295 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Hoxb3P09026 433 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Gnl1P36916 607 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Mcm5P49718 733 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Cct6aP80317 531 aaKnown RBP18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Zfp658Q5PPQ4 887 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Retreg2Q6NS82 541 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Gucy2gQ6TL19 1100 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Kcnt1Q6ZPR4 1224 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Cfap100Q80VN0 613 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 MrgpreQ91ZB7 310 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 TrabdQ99JY4 376 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Cpxm2Q9D2L5 764 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Prl2c5Q9JLV9 222 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Dnajb9Q9QYI6 222 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Mfap5Q9QZJ6 164 aa18.07■□□□□ 0.48
Trim54-201ENSMUST00000013771 Olfr1354E9Q5G9 310 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 AladP10518 330 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Stat4P42228 749 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Akr1b1P45376 316 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 InhbcP55104 352 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 SnrpfP62307 86 aaKnown RBP18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Ksr1Q61097 873 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Oxsr1Q6P9R2 527 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 DstykQ6XUX1 927 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Ano10Q8BH79 659 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Gramd1aQ8VEF1 722 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Hps3Q91VB4 1002 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Usp29Q9ES63 869 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 SpegQ62407 3262 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Tpm3-rs7D3Z2H9 248 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 TxkP42682 527 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Nol4P60954 483 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Wbp2P97765 261 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Pde1cQ64338 706 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Sox11Q7M6Y2 395 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Vtcn1Q7TSP5 283 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Ppp1r15bQ8BFW3 697 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Abi3Q8BYZ1 367 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Q8BZJ8 459 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Rasal3Q8C2K5 1041 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Mettl3Q8C3P7 580 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Adamts2Q8C9W3 1213 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Hip1Q8VD75 1029 aaKnown RBP18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Olfr385Q8VGT1 312 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 ArskQ9D2L1 553 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Q9D454 513 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Spry1Q9QXV9 313 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Trpc3Q9QZC1 836 aa18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Prpf40aQ9R1C7 953 aaKnown RBP18.06■□□□□ 0.48
Trim54-201ENSMUST00000013771 Ptpn3A2ALK8 913 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Brpf3B2KF05 1204 aaKnown RBP18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Vmn2r79E9Q067 851 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Cd160O88875 185 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Fcgr1P26151 404 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 SsbP32067 415 aaKnown RBP18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Man1a2P39098 641 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Mindy4Q3UQI9 744 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Tubal3Q3UX10 446 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Gm14851Q5ERJ0 116 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Paxip1Q6NZQ4 1056 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Zdhhc19Q810M5 347 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Tmprss7Q8BIK6 829 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Bend7Q8BSV3 434 aa18.05■□□□□ 0.48
Trim54-201ENSMUST00000013771 Tmem87aQ8BXN9 555 aa18.05■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms