RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Shroom1Q5SX79 823 aa13.32□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Foxn1Q61575 648 aa13.32□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ino80dQ66JY2 873 aaKnown RBP13.32□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rps6ka6Q7TPS0 764 aa13.32□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Tmc3Q7TQ69 1130 aa13.32□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Dpp3Q99KK7 738 aa13.32□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Chit1Q9D7Q1 464 aa13.32□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Dlc1Q9R0Z9 1092 aa13.32□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Vmn2r63E9Q0K5 859 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Gm9268E9Q0M3 861 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rap1gds1E9Q912 607 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Vmn2r62K7N712 859 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rpl21O09167 160 aaKnown RBP13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Epas1P97481 874 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Grm2Q14BI2 872 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Znf219Q6IQX8 726 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 IqceQ6PCQ0 778 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Camta2Q80Y50 1208 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Stau2Q8CJ67 570 aaKnown RBP13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Castor1Q9CWQ8 331 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Cnga3Q9JJZ8 631 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Slfn14V9GXG1 899 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Lrrc73B2RWC4 316 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Cyp2t4E9PWV0 503 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Magea1O89006 320 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Magea5O89009 320 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Vti1aO89116 217 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Prl3b1P09586 222 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 AmhP27106 555 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Brd9Q3UQU0 596 aaKnown RBP13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ccdc154Q6RUT8 657 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Btbd10Q80X66 475 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Frmd4aQ8BIE6 1020 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Slc39a13Q8BZH0 361 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Coq6Q8R1S0 476 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Trpv6Q91WD2 767 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ddx56Q9D0R4 546 aaKnown RBP13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Fam187aQ9D3R5 417 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Mrpl4Q9DCU6 294 aaKnown RBP13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Jph2Q9ET78 696 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 AllcQ9JHX6 414 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Dbn1Q9QXS6 706 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Magea2Q9R2A2 320 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Zfp558E9Q1J0 407 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rad51ap2G3UW63 976 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rpl7aP12970 266 aaKnown RBP13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 EsrrgP62509 458 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Edem3Q2HXL6 931 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ppp4r4Q8C0Y0 875 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ppp4r1Q8K2V1 951 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Vmn1r213Q8R278 384 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Q91Z58 1206 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Grhl1Q921D9 618 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Txnrd3Q99MD6 652 aa13.31□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Arhgef37A1IGU4 676 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Prdm12A2AJ77 365 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rpl10aP53026 217 aaKnown RBP13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Mark2Q05512 776 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Gm8773Q3UQ24 132 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 1810065E05RikQ5NC41 235 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 SpidrQ8BGX7 933 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Armc6Q8BNU0 468 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Tmem132cQ8CEF9 1099 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Clptm1Q8VBZ3 664 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Abcg3Q99P81 650 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Kifc1Q9QWT9 674 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Drg2Q9QXB9 364 aaKnown RBP13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Jag1Q9QXX0 1218 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ptpn4Q9WU22 926 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Mtmr1Q9Z2C4 669 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Peak1Q69Z38 1735 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Zscan4-ps1A0A1C7CYV3 506 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Zscan4dA7KBS4 506 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rgsl1H3BL40 1073 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 PrkceP16054 737 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rab21P35282 222 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rit2P70425 217 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 DselQ0VBN2 1207 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Mif4gdQ3UBZ5 222 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Zscan4fQ3URS2 506 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Znf148Q61624 794 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Zscan4cQ80VJ6 506 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 6820408C15RikQ8BJX2 354 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rmnd1Q8CI78 450 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Il17cQ8K4C5 194 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rmi1Q9D4G9 616 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Fip1l1Q9D824 581 aaKnown RBP13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Angptl2Q9R045 493 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Plch1Q4KWH5 1682 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 4931406B18RikA2RSL7 367 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Glt1d1A4FUP9 346 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ildr2B5TVM2 661 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Lipo2D3YY49 398 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 ItgalP24063 1163 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Serping1P97290 504 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Pitpnm3Q3UHE1 974 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Map3k10Q66L42 940 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ahcyl2Q68FL4 613 aaKnown RBP13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 PolnQ7TQ07 864 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Senp7Q8BUH8 1037 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms