RNA–Protein interactions for RNA: YPR172W

YPR172W, Transcript of Putative pyridoxal 5'-phosphate synthase, yeast

Gene YPR172W, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR172W	YPR172W	NUF2	P33895	451 aa		0.77	□□□□□ -2.29
YPR172W	YPR172W	CSH1	P38287	376 aa		0.77	□□□□□ -2.29
YPR172W	YPR172W	YAR064W	P39563	99 aa		0.77	□□□□□ -2.29
YPR172W	YPR172W	GLR1	P41921	483 aa	Known RBP	0.77	□□□□□ -2.29
YPR172W	YPR172W	SLH1	P53327	1967 aa	Known RBP	0.77	□□□□□ -2.29
YPR172W	YPR172W	RPL35A	P0CX84	120 aa	Known RBP	0.76	□□□□□ -2.29
YPR172W	YPR172W	RPL35B	P0CX85	120 aa	Known RBP	0.76	□□□□□ -2.29
YPR172W	YPR172W	SRP14	P38985	146 aa		0.76	□□□□□ -2.29
YPR172W	YPR172W	PAC10	P48363	199 aa		0.76	□□□□□ -2.29
YPR172W	YPR172W	YML079W	Q03629	201 aa		0.76	□□□□□ -2.29
YPR172W	YPR172W	HRD1	Q08109	551 aa		0.76	□□□□□ -2.29
YPR172W	YPR172W	TRM3	Q07527	1436 aa		0.75	□□□□□ -2.29
YPR172W	YPR172W	FMP49	A0A023PZB3	126 aa		0.75	□□□□□ -2.29
YPR172W	YPR172W	PRE1	P22141	198 aa	Known RBP	0.75	□□□□□ -2.29
YPR172W	YPR172W	EGD2	P38879	174 aa	Known RBP	0.75	□□□□□ -2.29
YPR172W	YPR172W	YEL073C	P39974	107 aa		0.75	□□□□□ -2.29
YPR172W	YPR172W	NQM1	P53228	333 aa	Predicted RBP	0.75	□□□□□ -2.29
YPR172W	YPR172W	YDL157C	Q12082	118 aa		0.75	□□□□□ -2.29
YPR172W	YPR172W	CCW12	Q12127	133 aa		0.75	□□□□□ -2.29
YPR172W	YPR172W	YLR050C	Q12155	161 aa	Known RBP	0.75	□□□□□ -2.29
YPR172W	YPR172W	RAD51	P25454	400 aa		0.74	□□□□□ -2.29
YPR172W	YPR172W	YKR070W	P36151	352 aa	Known RBP	0.74	□□□□□ -2.29
YPR172W	YPR172W	YER121W	P40076	114 aa		0.74	□□□□□ -2.29
YPR172W	YPR172W	YJR015W	P47090	510 aa		0.74	□□□□□ -2.29
YPR172W	YPR172W	YNL140C	P53910	189 aa		0.74	□□□□□ -2.29
YPR172W	YPR172W	HSK3	P69852	69 aa		0.74	□□□□□ -2.29
YPR172W	YPR172W	SAC3	P46674	1301 aa		0.73	□□□□□ -2.29
YPR172W	YPR172W	CMD1	P06787	147 aa	Known RBP	0.73	□□□□□ -2.29
YPR172W	YPR172W	RME1	P32338	300 aa	Known RBP	0.73	□□□□□ -2.29
YPR172W	YPR172W	SHB17	P36136	271 aa	Known RBP	0.73	□□□□□ -2.29
YPR172W	YPR172W	YGR269W	P40326	108 aa		0.73	□□□□□ -2.29
YPR172W	YPR172W	YGL230C	P53074	147 aa		0.73	□□□□□ -2.29
YPR172W	YPR172W	GIM5	Q04493	163 aa		0.73	□□□□□ -2.29
YPR172W	YPR172W	SYM1	Q06563	197 aa		0.73	□□□□□ -2.29
YPR172W	YPR172W	RPS25B	P0C0T4	108 aa	Known RBP	0.72	□□□□□ -2.29
YPR172W	YPR172W	YEL028W	P39989	153 aa		0.72	□□□□□ -2.29
YPR172W	YPR172W	YDC1	Q02896	317 aa		0.72	□□□□□ -2.29
YPR172W	YPR172W	RPS25A	Q3E792	108 aa	Predicted RBP	0.72	□□□□□ -2.29
YPR172W	YPR172W	SPS2	P08459	502 aa		0.71	□□□□□ -2.3
YPR172W	YPR172W	UBC6	P33296	250 aa	Predicted RBP	0.71	□□□□□ -2.3
YPR172W	YPR172W	TMA20	P89886	181 aa	Predicted RBP	0.71	□□□□□ -2.3
YPR172W	YPR172W	LIP1	Q03579	150 aa		0.71	□□□□□ -2.3
YPR172W	YPR172W	THI74	Q04083	370 aa		0.71	□□□□□ -2.3
YPR172W	YPR172W	AVO2	Q04749	426 aa		0.71	□□□□□ -2.3
YPR172W	YPR172W	KEI1	Q06346	221 aa		0.71	□□□□□ -2.3
YPR172W	YPR172W	UIP4	Q08926	304 aa		0.71	□□□□□ -2.3
YPR172W	YPR172W	APS3	P47064	194 aa		0.7	□□□□□ -2.3
YPR172W	YPR172W	GEP7	P53171	287 aa		0.7	□□□□□ -2.3
YPR172W	YPR172W	TMA23	Q03525	211 aa		0.7	□□□□□ -2.3
YPR172W	YPR172W	FCY1	Q12178	158 aa		0.7	□□□□□ -2.3
YPR172W	YPR172W	KIN28	P06242	306 aa		0.69	□□□□□ -2.3
YPR172W	YPR172W	PTC1	P35182	281 aa		0.69	□□□□□ -2.3
YPR172W	YPR172W	SRP102	P36057	244 aa	Predicted RBP	0.69	□□□□□ -2.3
YPR172W	YPR172W	TLG1	Q03322	224 aa		0.69	□□□□□ -2.3
YPR172W	YPR172W	ATG10	Q07879	167 aa		0.69	□□□□□ -2.3
YPR172W	YPR172W	INO4	P13902	151 aa		0.68	□□□□□ -2.3
YPR172W	YPR172W	VPS51	P36116	164 aa		0.68	□□□□□ -2.3
YPR172W	YPR172W	CIN5	P40917	295 aa		0.68	□□□□□ -2.3
YPR172W	YPR172W	ORM1	P53224	222 aa		0.68	□□□□□ -2.3
YPR172W	YPR172W	YDL241W	Q07738	123 aa		0.68	□□□□□ -2.3
YPR172W	YPR172W	RIF1	P29539	1916 aa		0.68	□□□□□ -2.3
YPR172W	YPR172W	TAF2	P23255	1407 aa		0.67	□□□□□ -2.3
YPR172W	YPR172W	YCR001W	P25347	104 aa		0.67	□□□□□ -2.3
YPR172W	YPR172W	YGL101W	P53144	215 aa		0.67	□□□□□ -2.3
YPR172W	YPR172W	VAM10	Q08474	114 aa		0.67	□□□□□ -2.3
YPR172W	YPR172W	CMC2	Q3E7A4	109 aa		0.67	□□□□□ -2.3
YPR172W	YPR172W	SPT14	P32363	452 aa		0.66	□□□□□ -2.3
YPR172W	YPR172W	YPT31	P38555	223 aa	Known RBP	0.66	□□□□□ -2.3
YPR172W	YPR172W	YNR064C	P53750	290 aa		0.66	□□□□□ -2.3
YPR172W	YPR172W	YPR114W	Q06107	315 aa		0.66	□□□□□ -2.3
YPR172W	YPR172W	YPR202W	Q08993	238 aa		0.66	□□□□□ -2.3
YPR172W	YPR172W	RDI1	Q12434	202 aa		0.66	□□□□□ -2.3
YPR172W	YPR172W	ATP5	P09457	212 aa		0.65	□□□□□ -2.31
YPR172W	YPR172W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.65	□□□□□ -2.31
YPR172W	YPR172W	UBI4	P0CG63	381 aa	Known RBP	0.65	□□□□□ -2.31
YPR172W	YPR172W	SLM6	P38343	150 aa		0.65	□□□□□ -2.31
YPR172W	YPR172W	GLC8	P41818	229 aa		0.65	□□□□□ -2.31
YPR172W	YPR172W	CCC1	P47818	322 aa		0.65	□□□□□ -2.31
YPR172W	YPR172W	MAK3	Q03503	176 aa		0.65	□□□□□ -2.31
YPR172W	YPR172W	YLR046C	Q12253	270 aa		0.65	□□□□□ -2.31
YPR172W	YPR172W	ADE6	P38972	1358 aa	Known RBP	0.65	□□□□□ -2.31
YPR172W	YPR172W	QCR2	P07257	368 aa		0.64	□□□□□ -2.31
YPR172W	YPR172W	ECM31	P38122	312 aa		0.64	□□□□□ -2.31
YPR172W	YPR172W	YEL014C	P39999	101 aa		0.64	□□□□□ -2.31
YPR172W	YPR172W	LSM3	P57743	89 aa	Known RBP	0.64	□□□□□ -2.31
YPR172W	YPR172W	YDR476C	Q03362	224 aa		0.64	□□□□□ -2.31
YPR172W	YPR172W	YLR053C	Q12026	108 aa		0.64	□□□□□ -2.31
YPR172W	YPR172W	CMC4	Q3E7A9	73 aa		0.64	□□□□□ -2.31
YPR172W	YPR172W	YHR213W-B	Q8TGK1	99 aa		0.64	□□□□□ -2.31
YPR172W	YPR172W	RPL30	P14120	105 aa	Known RBP	0.63	□□□□□ -2.31
YPR172W	YPR172W	MRS4	P23500	304 aa		0.63	□□□□□ -2.31
YPR172W	YPR172W	YBR027C	P38220	110 aa		0.63	□□□□□ -2.31
YPR172W	YPR172W	FES1	P38260	290 aa		0.63	□□□□□ -2.31
YPR172W	YPR172W	AME1	P38313	324 aa		0.63	□□□□□ -2.31
YPR172W	YPR172W	HTD2	P38790	280 aa	Known RBP	0.63	□□□□□ -2.31
YPR172W	YPR172W	FIP1	P45976	327 aa		0.63	□□□□□ -2.31
YPR172W	YPR172W	YDR102C	Q03864	110 aa		0.63	□□□□□ -2.31
YPR172W	YPR172W	RPS28B	P0C0X0	67 aa	Known RBP	0.62	□□□□□ -2.31
YPR172W	YPR172W	HYP2	P23301	157 aa	Known RBP	0.62	□□□□□ -2.31
YPR172W	YPR172W	HSP150	P32478	413 aa		0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 107.7 ms