RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W YEL073CP39974 107 aa0.6□□□□□ -2.31
YOP1YPR028W YFL051CP43552 160 aa0.6□□□□□ -2.31
YOP1YPR028W NQM1P53228 333 aaPredicted RBP0.6□□□□□ -2.31
YOP1YPR028W YML079WQ03629 201 aa0.6□□□□□ -2.31
YOP1YPR028W AIM36Q03798 255 aa0.6□□□□□ -2.31
YOP1YPR028W SYM1Q06563 197 aa0.6□□□□□ -2.31
YOP1YPR028W YDL157CQ12082 118 aa0.6□□□□□ -2.31
YOP1YPR028W TRM3Q07527 1436 aa0.6□□□□□ -2.31
YOP1YPR028W ACC1Q00955 2233 aaKnown RBP0.59□□□□□ -2.31
YOP1YPR028W RPL35AP0CX84 120 aaKnown RBP0.59□□□□□ -2.31
YOP1YPR028W RPL35BP0CX85 120 aaKnown RBP0.59□□□□□ -2.31
YOP1YPR028W PRE1P22141 198 aaKnown RBP0.59□□□□□ -2.31
YOP1YPR028W YIL102CP40488 101 aa0.59□□□□□ -2.31
YOP1YPR028W DCV1P43595 202 aa0.59□□□□□ -2.31
YOP1YPR028W YNL140CP53910 189 aa0.59□□□□□ -2.31
YOP1YPR028W TMA20P89886 181 aaPredicted RBP0.59□□□□□ -2.31
YOP1YPR028W THI74Q04083 370 aa0.59□□□□□ -2.31
YOP1YPR028W GIM5Q04493 163 aa0.59□□□□□ -2.31
YOP1YPR028W SAC3P46674 1301 aa0.59□□□□□ -2.32
YOP1YPR028W UGX2P32772 223 aa0.58□□□□□ -2.32
YOP1YPR028W UBC6P33296 250 aaPredicted RBP0.58□□□□□ -2.32
YOP1YPR028W SHB17P36136 271 aaKnown RBP0.58□□□□□ -2.32
YOP1YPR028W CSH1P38287 376 aa0.58□□□□□ -2.32
YOP1YPR028W YAR064WP39563 99 aa0.58□□□□□ -2.32
YOP1YPR028W YEL028WP39989 153 aa0.58□□□□□ -2.32
YOP1YPR028W YGR269WP40326 108 aa0.58□□□□□ -2.32
YOP1YPR028W YJR015WP47090 510 aa0.58□□□□□ -2.32
YOP1YPR028W HSK3P69852 69 aa0.58□□□□□ -2.32
YOP1YPR028W LIP1Q03579 150 aa0.58□□□□□ -2.32
YOP1YPR028W SPS2P08459 502 aa0.57□□□□□ -2.32
YOP1YPR028W RPS25BP0C0T4 108 aaKnown RBP0.57□□□□□ -2.32
YOP1YPR028W PTC1P35182 281 aa0.57□□□□□ -2.32
YOP1YPR028W SRP102P36057 244 aaPredicted RBP0.57□□□□□ -2.32
YOP1YPR028W YKR070WP36151 352 aaKnown RBP0.57□□□□□ -2.32
YOP1YPR028W YGL230CP53074 147 aa0.57□□□□□ -2.32
YOP1YPR028W YDC1Q02896 317 aa0.57□□□□□ -2.32
YOP1YPR028W AVO2Q04749 426 aa0.57□□□□□ -2.32
YOP1YPR028W ATG10Q07879 167 aa0.57□□□□□ -2.32
YOP1YPR028W UIP4Q08926 304 aa0.57□□□□□ -2.32
YOP1YPR028W CCW12Q12127 133 aa0.57□□□□□ -2.32
YOP1YPR028W RPS25AQ3E792 108 aaPredicted RBP0.57□□□□□ -2.32
YOP1YPR028W CHD1P32657 1468 aa0.56□□□□□ -2.32
YOP1YPR028W FMP49A0A023PZB3 126 aa0.56□□□□□ -2.32
YOP1YPR028W YGL101WP53144 215 aa0.56□□□□□ -2.32
YOP1YPR028W GEP7P53171 287 aa0.56□□□□□ -2.32
YOP1YPR028W MAK3Q03503 176 aa0.56□□□□□ -2.32
YOP1YPR028W KEI1Q06346 221 aa0.56□□□□□ -2.32
YOP1YPR028W YLR053CQ12026 108 aa0.56□□□□□ -2.32
YOP1YPR028W CMC2Q3E7A4 109 aa0.56□□□□□ -2.32
YOP1YPR028W KIN28P06242 306 aa0.55□□□□□ -2.32
YOP1YPR028W INO4P13902 151 aa0.55□□□□□ -2.32
YOP1YPR028W YPT31P38555 223 aaKnown RBP0.55□□□□□ -2.32
YOP1YPR028W YER121WP40076 114 aa0.55□□□□□ -2.32
YOP1YPR028W APS3P47064 194 aa0.55□□□□□ -2.32
YOP1YPR028W YDR476CQ03362 224 aa0.55□□□□□ -2.32
YOP1YPR028W YPR114WQ06107 315 aa0.55□□□□□ -2.32
YOP1YPR028W FCY1Q12178 158 aa0.55□□□□□ -2.32
YOP1YPR028W RDI1Q12434 202 aa0.55□□□□□ -2.32
YOP1YPR028W SLH1P53327 1967 aaKnown RBP0.54□□□□□ -2.32
YOP1YPR028W FAS1P07149 2051 aaKnown RBP0.54□□□□□ -2.32
YOP1YPR028W ATP5P09457 212 aa0.54□□□□□ -2.32
YOP1YPR028W SPT14P32363 452 aa0.54□□□□□ -2.32
YOP1YPR028W FES1P38260 290 aa0.54□□□□□ -2.32
YOP1YPR028W HTD2P38790 280 aaKnown RBP0.54□□□□□ -2.32
YOP1YPR028W CIN5P40917 295 aa0.54□□□□□ -2.32
YOP1YPR028W YNR064CP53750 290 aa0.54□□□□□ -2.32
YOP1YPR028W LSM3P57743 89 aaKnown RBP0.54□□□□□ -2.32
YOP1YPR028W TMA23Q03525 211 aa0.54□□□□□ -2.32
YOP1YPR028W YDR102CQ03864 110 aa0.54□□□□□ -2.32
YOP1YPR028W YLR046CQ12253 270 aa0.54□□□□□ -2.32
YOP1YPR028W TAF2P23255 1407 aa0.54□□□□□ -2.32
YOP1YPR028W UBI4P0CG63 381 aaKnown RBP0.53□□□□□ -2.32
YOP1YPR028W YEL014CP39999 101 aa0.53□□□□□ -2.32
YOP1YPR028W DLS1P40366 167 aa0.53□□□□□ -2.32
YOP1YPR028W GLC8P41818 229 aa0.53□□□□□ -2.32
YOP1YPR028W YDL241WQ07738 123 aa0.53□□□□□ -2.32
YOP1YPR028W VAM10Q08474 114 aa0.53□□□□□ -2.32
YOP1YPR028W ADE6P38972 1358 aaKnown RBP0.53□□□□□ -2.32
YOP1YPR028W QCR2P07257 368 aa0.52□□□□□ -2.33
YOP1YPR028W YCR001WP25347 104 aa0.52□□□□□ -2.33
YOP1YPR028W ECM31P38122 312 aa0.52□□□□□ -2.33
YOP1YPR028W YBR027CP38220 110 aa0.52□□□□□ -2.33
YOP1YPR028W CCC1P47818 322 aa0.52□□□□□ -2.33
YOP1YPR028W ORM1P53224 222 aa0.52□□□□□ -2.33
YOP1YPR028W NMA1Q06178 401 aaKnown RBP0.52□□□□□ -2.33
YOP1YPR028W YPD1Q07688 167 aa0.52□□□□□ -2.33
YOP1YPR028W PBI2P0CT04 75 aaKnown RBP0.51□□□□□ -2.33
YOP1YPR028W RPL30P14120 105 aaKnown RBP0.51□□□□□ -2.33
YOP1YPR028W AME1P38313 324 aa0.51□□□□□ -2.33
YOP1YPR028W APQ12P40532 138 aa0.51□□□□□ -2.33
YOP1YPR028W YGL193CP53097 103 aa0.51□□□□□ -2.33
YOP1YPR028W FMN1Q03778 218 aa0.51□□□□□ -2.33
YOP1YPR028W YLR422WQ06409 1932 aa0.51□□□□□ -2.33
YOP1YPR028W CMC4Q3E7A9 73 aa0.51□□□□□ -2.33
YOP1YPR028W DUR1,2P32528 1835 aaKnown RBP0.5□□□□□ -2.33
YOP1YPR028W SPA2P23201 1466 aaKnown RBP0.5□□□□□ -2.33
YOP1YPR028W RPS28BP0C0X0 67 aaKnown RBP0.5□□□□□ -2.33
YOP1YPR028W YOL013W-AP0C272 63 aaPredicted RBP0.5□□□□□ -2.33
YOP1YPR028W YGL041W-AP0C5N3 154 aa0.5□□□□□ -2.33
YOP1YPR028W HYP2P23301 157 aaKnown RBP0.5□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms