RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W RAF1Q06891 181 aa1.89□□□□□ -2.11
SEC16YPL085W DTD1Q07648 150 aaKnown RBP1.89□□□□□ -2.11
SEC16YPL085W LAS17Q12446 633 aa1.89□□□□□ -2.11
SEC16YPL085W YKL023C-AQ2V2P3 75 aa1.89□□□□□ -2.11
SEC16YPL085W YJR112W-AQ3E743 109 aa1.89□□□□□ -2.11
SEC16YPL085W TMA7Q3E764 64 aaKnown RBP1.89□□□□□ -2.11
SEC16YPL085W MRPS5P33759 307 aa1.88□□□□□ -2.11
SEC16YPL085W YKL069WP36088 180 aa1.88□□□□□ -2.11
SEC16YPL085W PDX3P38075 228 aaKnown RBP1.88□□□□□ -2.11
SEC16YPL085W PTH1P38876 190 aaKnown RBP1.88□□□□□ -2.11
SEC16YPL085W OST1P41543 476 aaKnown RBP1.88□□□□□ -2.11
SEC16YPL085W MIC26P50087 233 aa1.88□□□□□ -2.11
SEC16YPL085W YDR209CQ03480 137 aa1.88□□□□□ -2.11
SEC16YPL085W GIM5Q04493 163 aa1.88□□□□□ -2.11
SEC16YPL085W HMS1Q12398 434 aa1.88□□□□□ -2.11
SEC16YPL085W YOR020W-AQ3E824 90 aa1.88□□□□□ -2.11
SEC16YPL085W ROX3P25046 220 aa1.88□□□□□ -2.11
SEC16YPL085W SRP21P32342 167 aa1.88□□□□□ -2.11
SEC16YPL085W ERG26P53199 349 aaKnown RBP1.88□□□□□ -2.11
SEC16YPL085W FMP48P53233 369 aa1.88□□□□□ -2.11
SEC16YPL085W TEX1P53851 422 aaKnown RBP1.88□□□□□ -2.11
SEC16YPL085W DCI1Q08558 271 aa1.88□□□□□ -2.11
SEC16YPL085W TIM18Q08749 192 aa1.88□□□□□ -2.11
SEC16YPL085W PST1Q12355 444 aa1.88□□□□□ -2.11
SEC16YPL085W TOR1P35169 2470 aa1.88□□□□□ -2.11
SEC16YPL085W YER039C-AP0CD97 72 aa1.88□□□□□ -2.11
SEC16YPL085W CPR2P23285 205 aa1.88□□□□□ -2.11
SEC16YPL085W RPB7P34087 171 aa1.88□□□□□ -2.11
SEC16YPL085W YDL241WQ07738 123 aa1.88□□□□□ -2.11
SEC16YPL085W CSI2Q08054 341 aa1.88□□□□□ -2.11
SEC16YPL085W YOR387CQ08910 206 aa1.88□□□□□ -2.11
SEC16YPL085W RNP1P32385 249 aa1.88□□□□□ -2.11
SEC16YPL085W YIR035CP40579 254 aa1.88□□□□□ -2.11
SEC16YPL085W MST27P53176 234 aa1.88□□□□□ -2.11
SEC16YPL085W YPL108WQ02872 168 aaPredicted RBP1.88□□□□□ -2.11
SEC16YPL085W FCY1Q12178 158 aa1.88□□□□□ -2.11
SEC16YPL085W EAF3Q12432 401 aa1.88□□□□□ -2.11
SEC16YPL085W QCR8P08525 94 aa1.88□□□□□ -2.11
SEC16YPL085W HCH1P53834 153 aa1.88□□□□□ -2.11
SEC16YPL085W YIF1P53845 314 aaKnown RBP1.88□□□□□ -2.11
SEC16YPL085W FIT3Q08907 204 aa1.88□□□□□ -2.11
SEC16YPL085W DAD1Q12248 94 aa1.88□□□□□ -2.11
SEC16YPL085W VMA9Q3E7B6 73 aa1.88□□□□□ -2.11
SEC16YPL085W RPL31AP0C2H8 113 aaKnown RBP1.88□□□□□ -2.11
SEC16YPL085W RPL31BP0C2H9 113 aaKnown RBP1.88□□□□□ -2.11
SEC16YPL085W RPI1P23250 407 aaKnown RBP1.88□□□□□ -2.11
SEC16YPL085W YCR085WP25650 117 aa1.88□□□□□ -2.11
SEC16YPL085W YBL059WP34224 193 aa1.88□□□□□ -2.11
SEC16YPL085W PAU16P35994 123 aa1.88□□□□□ -2.11
SEC16YPL085W RIB5P38145 238 aa1.88□□□□□ -2.11
SEC16YPL085W YIL152WP40455 235 aa1.88□□□□□ -2.11
SEC16YPL085W YFL012WP43580 148 aa1.88□□□□□ -2.11
SEC16YPL085W IRC25Q07951 179 aa1.88□□□□□ -2.11
SEC16YPL085W YNR034W-AQ3E841 98 aa1.88□□□□□ -2.11
SEC16YPL085W YER190C-BP0CX94 160 aa1.87□□□□□ -2.11
SEC16YPL085W YEL077W-AP0CX95 160 aa1.87□□□□□ -2.11
SEC16YPL085W YGR296C-BP0CX96 160 aa1.87□□□□□ -2.11
SEC16YPL085W YPL283W-BP0CX97 160 aa1.87□□□□□ -2.11
SEC16YPL085W YPR204C-AP0CX98 160 aa1.87□□□□□ -2.11
SEC16YPL085W DAD2P36162 133 aa1.87□□□□□ -2.11
SEC16YPL085W YEA6P39953 335 aa1.87□□□□□ -2.11
SEC16YPL085W TIR3P40552 269 aa1.87□□□□□ -2.11
SEC16YPL085W KEG1P43614 200 aa1.87□□□□□ -2.11
SEC16YPL085W MRPL44P19956 98 aa1.87□□□□□ -2.11
SEC16YPL085W DER1P38307 211 aa1.87□□□□□ -2.11
SEC16YPL085W YGR045CP53229 120 aa1.87□□□□□ -2.11
SEC16YPL085W STP4Q07351 490 aa1.87□□□□□ -2.11
SEC16YPL085W SME1Q12330 94 aaPredicted RBP1.87□□□□□ -2.11
SEC16YPL085W HKR1P41809 1802 aa1.87□□□□□ -2.11
SEC16YPL085W DDI2P0CH63 225 aa1.87□□□□□ -2.11
SEC16YPL085W DDI3P0CH64 225 aa1.87□□□□□ -2.11
SEC16YPL085W RPS16AP0CX51 143 aaKnown RBP1.87□□□□□ -2.11
SEC16YPL085W RPS16BP0CX52 143 aaKnown RBP1.87□□□□□ -2.11
SEC16YPL085W URA5P13298 226 aaKnown RBP1.87□□□□□ -2.11
SEC16YPL085W EMC4P53073 190 aa1.87□□□□□ -2.11
SEC16YPL085W BRP1P53194 125 aa1.87□□□□□ -2.11
SEC16YPL085W YDR042CQ03205 200 aa1.87□□□□□ -2.11
SEC16YPL085W TIM22Q12328 207 aa1.87□□□□□ -2.11
SEC16YPL085W FUN14P18411 198 aa1.87□□□□□ -2.11
SEC16YPL085W KTI12P34253 313 aaKnown RBP1.87□□□□□ -2.11
SEC16YPL085W MPC2P38857 129 aa1.87□□□□□ -2.11
SEC16YPL085W YIL077CP40508 320 aa1.87□□□□□ -2.11
SEC16YPL085W YJR015WP47090 510 aa1.87□□□□□ -2.11
SEC16YPL085W TIM13P53299 105 aa1.87□□□□□ -2.11
SEC16YPL085W SAE3P89114 91 aa1.87□□□□□ -2.11
SEC16YPL085W YPL077CQ02831 240 aa1.87□□□□□ -2.11
SEC16YPL085W SPG4Q04438 115 aa1.87□□□□□ -2.11
SEC16YPL085W RFM1Q12192 310 aa1.87□□□□□ -2.11
SEC16YPL085W ISD11Q6Q560 94 aa1.87□□□□□ -2.11
SEC16YPL085W ANB1P19211 157 aa1.87□□□□□ -2.11
SEC16YPL085W ALG14P38242 237 aa1.87□□□□□ -2.11
SEC16YPL085W SNO3P43544 222 aa1.87□□□□□ -2.11
SEC16YPL085W LCB3P47013 409 aa1.87□□□□□ -2.11
SEC16YPL085W TOS6P48560 102 aa1.87□□□□□ -2.11
SEC16YPL085W SNO2P53823 222 aa1.87□□□□□ -2.11
SEC16YPL085W COA4Q05809 96 aa1.87□□□□□ -2.11
SEC16YPL085W GEP3Q08622 556 aa1.87□□□□□ -2.11
SEC16YPL085W SWT1Q12104 458 aa1.87□□□□□ -2.11
SEC16YPL085W YER145C-AA0A023PYF4 145 aa1.86□□□□□ -2.11
SEC16YPL085W YFR057WP43625 151 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms