RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W MST27P53176 234 aa7.79□□□□□ -1.16
UBA4YHR111W SHH3Q04487 196 aa7.79□□□□□ -1.16
UBA4YHR111W ANT1Q06497 328 aa7.79□□□□□ -1.16
UBA4YHR111W YGL194C-AQ2V2P6 80 aa7.79□□□□□ -1.16
UBA4YHR111W GLE2P40066 365 aa7.78□□□□□ -1.16
UBA4YHR111W SIM1P40472 476 aa7.78□□□□□ -1.16
UBA4YHR111W TDA4P47153 279 aa7.78□□□□□ -1.16
UBA4YHR111W HST4P53688 370 aa7.78□□□□□ -1.16
UBA4YHR111W GCN3P14741 305 aa7.78□□□□□ -1.16
UBA4YHR111W AUA1P32450 94 aa7.78□□□□□ -1.16
UBA4YHR111W SHB17P36136 271 aaKnown RBP7.78□□□□□ -1.16
UBA4YHR111W PTC7P38797 343 aa7.78□□□□□ -1.16
UBA4YHR111W PEX7P39108 375 aa7.78□□□□□ -1.16
UBA4YHR111W ATG27P46989 271 aa7.78□□□□□ -1.16
UBA4YHR111W DUO1P53168 247 aaKnown RBP7.78□□□□□ -1.16
UBA4YHR111W ALG13P53178 202 aa7.78□□□□□ -1.16
UBA4YHR111W ORM1P53224 222 aa7.78□□□□□ -1.16
UBA4YHR111W YDL242WQ07746 117 aa7.78□□□□□ -1.16
UBA4YHR111W ERS1P17261 260 aa7.77□□□□□ -1.17
UBA4YHR111W SIP1P32578 815 aa7.77□□□□□ -1.17
UBA4YHR111W IMP2P46972 177 aa7.77□□□□□ -1.17
UBA4YHR111W FYV6P53913 173 aa7.77□□□□□ -1.17
UBA4YHR111W CTR3Q06686 241 aa7.77□□□□□ -1.17
UBA4YHR111W AYT1Q12226 474 aa7.77□□□□□ -1.17
UBA4YHR111W YBL059WP34224 193 aa7.76□□□□□ -1.17
UBA4YHR111W YRA2P36036 203 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
UBA4YHR111W SFT2P38166 215 aa7.76□□□□□ -1.17
UBA4YHR111W FLO5P38894 1075 aa7.76□□□□□ -1.17
UBA4YHR111W SAS2P40963 338 aa7.76□□□□□ -1.17
UBA4YHR111W YMR007WQ03675 126 aa7.76□□□□□ -1.17
UBA4YHR111W CMC1P36064 111 aa7.75□□□□□ -1.17
UBA4YHR111W ASP1P38986 381 aaPredicted RBP7.75□□□□□ -1.17
UBA4YHR111W YLR125WQ12138 136 aa7.75□□□□□ -1.17
UBA4YHR111W QCR9P22289 66 aa7.74□□□□□ -1.17
UBA4YHR111W SPO13P23624 291 aa7.74□□□□□ -1.17
UBA4YHR111W CDC50P25656 391 aa7.74□□□□□ -1.17
UBA4YHR111W AHT1P29589 182 aa7.74□□□□□ -1.17
UBA4YHR111W EMP24P32803 203 aaKnown RBP7.74□□□□□ -1.17
UBA4YHR111W DER1P38307 211 aa7.74□□□□□ -1.17
UBA4YHR111W PET100P38958 111 aa7.74□□□□□ -1.17
UBA4YHR111W GPI2P46961 280 aa7.74□□□□□ -1.17
UBA4YHR111W MIC26P50087 233 aa7.74□□□□□ -1.17
UBA4YHR111W YNR066CP53752 436 aa7.74□□□□□ -1.17
UBA4YHR111W UBC7Q02159 165 aa7.74□□□□□ -1.17
UBA4YHR111W YOR011W-AQ3E807 68 aa7.74□□□□□ -1.17
UBA4YHR111W UBI4P0CG63 381 aaKnown RBP7.73□□□□□ -1.17
UBA4YHR111W LSM2P38203 95 aaKnown RBP7.73□□□□□ -1.17
UBA4YHR111W GCV3P39726 170 aaPredicted RBP7.73□□□□□ -1.17
UBA4YHR111W SRB7P47822 140 aa7.73□□□□□ -1.17
UBA4YHR111W JAC1P53193 184 aa7.73□□□□□ -1.17
UBA4YHR111W YNR071CP53757 342 aa7.73□□□□□ -1.17
UBA4YHR111W MRPS17Q03246 237 aaPredicted RBP7.73□□□□□ -1.17
UBA4YHR111W SCW10Q04951 389 aa7.73□□□□□ -1.17
UBA4YHR111W IZH3Q07959 543 aa7.73□□□□□ -1.17
UBA4YHR111W LCB3P47013 409 aa7.72□□□□□ -1.17
UBA4YHR111W YGR025WP53216 100 aa7.72□□□□□ -1.17
UBA4YHR111W MRPL50P53724 139 aa7.72□□□□□ -1.17
UBA4YHR111W AVO2Q04749 426 aa7.72□□□□□ -1.17
UBA4YHR111W TIR2P33890 251 aa7.71□□□□□ -1.18
UBA4YHR111W SRL3P36167 246 aa7.71□□□□□ -1.18
UBA4YHR111W YIL077CP40508 320 aa7.71□□□□□ -1.18
UBA4YHR111W YIP3P53633 176 aa7.71□□□□□ -1.18
UBA4YHR111W PRE9P23638 258 aaKnown RBP7.7□□□□□ -1.18
UBA4YHR111W AIM24P47127 394 aa7.7□□□□□ -1.18
UBA4YHR111W GNP1P48813 663 aa7.7□□□□□ -1.18
UBA4YHR111W PRM7Q12459 698 aa7.7□□□□□ -1.18
UBA4YHR111W NRG2P38082 220 aa7.69□□□□□ -1.18
UBA4YHR111W RIB4P50861 169 aaPredicted RBP7.69□□□□□ -1.18
UBA4YHR111W IZH1Q03419 316 aa7.69□□□□□ -1.18
UBA4YHR111W YOL160WQ08321 113 aa7.69□□□□□ -1.18
UBA4YHR111W DDI2P0CH63 225 aa7.68□□□□□ -1.18
UBA4YHR111W DDI3P0CH64 225 aa7.68□□□□□ -1.18
UBA4YHR111W YBR292CP38357 123 aa7.68□□□□□ -1.18
UBA4YHR111W COX12Q01519 83 aa7.68□□□□□ -1.18
UBA4YHR111W PLP1Q04004 230 aa7.68□□□□□ -1.18
UBA4YHR111W ATC1Q04005 294 aa7.68□□□□□ -1.18
UBA4YHR111W YOR015WQ12169 119 aa7.68□□□□□ -1.18
UBA4YHR111W YNL146C-AQ3E7Z1 64 aa7.68□□□□□ -1.18
UBA4YHR111W RPS2P25443 254 aaKnown RBP7.67□□□□□ -1.18
UBA4YHR111W MLF3P32047 452 aa7.67□□□□□ -1.18
UBA4YHR111W YPL162CQ12042 273 aa7.67□□□□□ -1.18
UBA4YHR111W ZRC1P20107 442 aa7.66□□□□□ -1.18
UBA4YHR111W PHD1P36093 366 aa7.66□□□□□ -1.18
UBA4YHR111W DSK2P48510 373 aa7.66□□□□□ -1.18
UBA4YHR111W CAF40P53829 373 aa7.66□□□□□ -1.18
UBA4YHR111W ADD37Q03233 198 aa7.66□□□□□ -1.18
UBA4YHR111W YMR244WQ04018 355 aa7.66□□□□□ -1.18
UBA4YHR111W HSP12P22943 109 aaKnown RBP7.65□□□□□ -1.18
UBA4YHR111W ACP1P32463 125 aa7.65□□□□□ -1.18
UBA4YHR111W EMC5P40540 141 aa7.65□□□□□ -1.18
UBA4YHR111W GEP3Q08622 556 aa7.65□□□□□ -1.18
UBA4YHR111W YER135CP40082 130 aa7.64□□□□□ -1.19
UBA4YHR111W FIT2Q08906 153 aa7.64□□□□□ -1.19
UBA4YHR111W MBB1P39534 108 aa7.63□□□□□ -1.19
UBA4YHR111W YCL001W-AP87012 153 aa7.63□□□□□ -1.19
UBA4YHR111W MRX11Q03079 207 aa7.63□□□□□ -1.19
UBA4YHR111W MRPS8Q03799 155 aa7.63□□□□□ -1.19
UBA4YHR111W MRP2P10663 115 aaPredicted RBP7.62□□□□□ -1.19
UBA4YHR111W TRS20P38334 175 aa7.62□□□□□ -1.19
UBA4YHR111W ISU1Q03020 165 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms