RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	GRX5	Q02784	150 aa		0.53	□□□□□ -2.33
SCW11	YGL028C	PEX11	Q12462	236 aa		0.53	□□□□□ -2.33
SCW11	YGL028C	AHT1	P29589	182 aa		0.52	□□□□□ -2.33
SCW11	YGL028C	CSH1	P38287	376 aa		0.52	□□□□□ -2.33
SCW11	YGL028C	GLR1	P41921	483 aa	Known RBP	0.52	□□□□□ -2.33
SCW11	YGL028C	SBH2	P52871	88 aa		0.52	□□□□□ -2.33
SCW11	YGL028C	FIT1	Q04433	528 aa		0.52	□□□□□ -2.33
SCW11	YGL028C	GIM5	Q04493	163 aa		0.52	□□□□□ -2.33
SCW11	YGL028C	SYM1	Q06563	197 aa		0.52	□□□□□ -2.33
SCW11	YGL028C	RAD6	P06104	172 aa		0.51	□□□□□ -2.33
SCW11	YGL028C	SRP14	P38985	146 aa		0.51	□□□□□ -2.33
SCW11	YGL028C	YEL028W	P39989	153 aa		0.51	□□□□□ -2.33
SCW11	YGL028C	YGL230C	P53074	147 aa		0.51	□□□□□ -2.33
SCW11	YGL028C	TIM13	P53299	105 aa		0.51	□□□□□ -2.33
SCW11	YGL028C	PLP1	Q04004	230 aa		0.51	□□□□□ -2.33
SCW11	YGL028C	THI74	Q04083	370 aa		0.51	□□□□□ -2.33
SCW11	YGL028C	CCW12	Q12127	133 aa		0.51	□□□□□ -2.33
SCW11	YGL028C	CMD1	P06787	147 aa	Known RBP	0.5	□□□□□ -2.33
SCW11	YGL028C	INO4	P13902	151 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	UGX2	P32772	223 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	SHB17	P36136	271 aa	Known RBP	0.5	□□□□□ -2.33
SCW11	YGL028C	YER121W	P40076	114 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	GLC8	P41818	229 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	YFL051C	P43552	160 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	RPL37B	P51402	88 aa	Known RBP	0.5	□□□□□ -2.33
SCW11	YGL028C	YML079W	Q03629	201 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	AIM36	Q03798	255 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	YDR102C	Q03864	110 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	AVO2	Q04749	426 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	TRM3	Q07527	1436 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	UBR1	P19812	1950 aa		0.5	□□□□□ -2.33
SCW11	YGL028C	SPS2	P08459	502 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	YKR070W	P36151	352 aa	Known RBP	0.49	□□□□□ -2.33
SCW11	YGL028C	YGR269W	P40326	108 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	DCV1	P43595	202 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	HHT1	P61830	136 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	LIP1	Q03579	150 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	YDL241W	Q07738	123 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	ATG10	Q07879	167 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	SAC3	P46674	1301 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	UBI4	P0CG63	381 aa	Known RBP	0.49	□□□□□ -2.33
SCW11	YGL028C	VPS51	P36116	164 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	YPT31	P38555	223 aa	Known RBP	0.49	□□□□□ -2.33
SCW11	YGL028C	MOB1	P40484	314 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	YPR114W	Q06107	315 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	RDI1	Q12434	202 aa		0.49	□□□□□ -2.33
SCW11	YGL028C	RPS25B	P0C0T4	108 aa	Known RBP	0.48	□□□□□ -2.33
SCW11	YGL028C	PTC1	P35182	281 aa		0.48	□□□□□ -2.33
SCW11	YGL028C	APS3	P47064	194 aa		0.48	□□□□□ -2.33
SCW11	YGL028C	YJR015W	P47090	510 aa		0.48	□□□□□ -2.33
SCW11	YGL028C	YGL101W	P53144	215 aa		0.48	□□□□□ -2.33
SCW11	YGL028C	ORM1	P53224	222 aa		0.48	□□□□□ -2.33
SCW11	YGL028C	TMA20	P89886	181 aa	Predicted RBP	0.48	□□□□□ -2.33
SCW11	YGL028C	YDC1	Q02896	317 aa		0.48	□□□□□ -2.33
SCW11	YGL028C	KEI1	Q06346	221 aa		0.48	□□□□□ -2.33
SCW11	YGL028C	YDL157C	Q12082	118 aa		0.48	□□□□□ -2.33
SCW11	YGL028C	RPS25A	Q3E792	108 aa	Predicted RBP	0.48	□□□□□ -2.33
SCW11	YGL028C	PRP8	P33334	2413 aa	Known RBP	0.47	□□□□□ -2.33
SCW11	YGL028C	KIN28	P06242	306 aa		0.47	□□□□□ -2.33
SCW11	YGL028C	ATP5	P09457	212 aa		0.47	□□□□□ -2.33
SCW11	YGL028C	SPT14	P32363	452 aa		0.47	□□□□□ -2.33
SCW11	YGL028C	FES1	P38260	290 aa		0.47	□□□□□ -2.33
SCW11	YGL028C	YAR064W	P39563	99 aa		0.47	□□□□□ -2.33
SCW11	YGL028C	YNR064C	P53750	290 aa		0.47	□□□□□ -2.33
SCW11	YGL028C	YLR053C	Q12026	108 aa		0.47	□□□□□ -2.33
SCW11	YGL028C	CMC2	Q3E7A4	109 aa		0.47	□□□□□ -2.33
SCW11	YGL028C	CMC4	Q3E7A9	73 aa		0.47	□□□□□ -2.33
SCW11	YGL028C	TAF2	P23255	1407 aa		0.47	□□□□□ -2.33
SCW11	YGL028C	PRE1	P22141	198 aa	Known RBP	0.46	□□□□□ -2.34
SCW11	YGL028C	MRS4	P23500	304 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	SRP102	P36057	244 aa	Predicted RBP	0.46	□□□□□ -2.34
SCW11	YGL028C	YIL102C	P40488	101 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	CCC1	P47818	322 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	LSM3	P57743	89 aa	Known RBP	0.46	□□□□□ -2.34
SCW11	YGL028C	HRD1	Q08109	551 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	UIP4	Q08926	304 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	YPR202W	Q08993	238 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	LAA1	P39526	2014 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	RPL30	P14120	105 aa	Known RBP	0.46	□□□□□ -2.34
SCW11	YGL028C	UBC6	P33296	250 aa	Predicted RBP	0.46	□□□□□ -2.34
SCW11	YGL028C	ATG8	P38182	117 aa	RIP-Chip data	0.46	□□□□□ -2.34	not detected
SCW11	YGL028C	SLM6	P38343	150 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	HTD2	P38790	280 aa	Known RBP	0.46	□□□□□ -2.34
SCW11	YGL028C	DLS1	P40366	167 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	FIP1	P45976	327 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	GEP7	P53171	287 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	TMA23	Q03525	211 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	FCY1	Q12178	158 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	YLR046C	Q12253	270 aa		0.46	□□□□□ -2.34
SCW11	YGL028C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.45	□□□□□ -2.34
SCW11	YGL028C	SRP21	P32342	167 aa		0.45	□□□□□ -2.34
SCW11	YGL028C	YBR027C	P38220	110 aa		0.45	□□□□□ -2.34
SCW11	YGL028C	AME1	P38313	324 aa		0.45	□□□□□ -2.34
SCW11	YGL028C	YEL014C	P39999	101 aa		0.45	□□□□□ -2.34
SCW11	YGL028C	APQ12	P40532	138 aa		0.45	□□□□□ -2.34
SCW11	YGL028C	CIN5	P40917	295 aa		0.45	□□□□□ -2.34
SCW11	YGL028C	NSL1	Q12143	216 aa		0.45	□□□□□ -2.34
SCW11	YGL028C	ADE6	P38972	1358 aa	Known RBP	0.44	□□□□□ -2.34
SCW11	YGL028C	GSC2	P40989	1895 aa		0.44	□□□□□ -2.34
SCW11	YGL028C	QCR2	P07257	368 aa		0.44	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms