RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W TMA7Q3E764 64 aaKnown RBP6.58□□□□□ -1.36
NDE2YDL085W GLC8P41818 229 aa6.57□□□□□ -1.36
NDE2YDL085W SSU72P53538 206 aaPredicted RBP6.57□□□□□ -1.36
NDE2YDL085W MCH1Q07376 486 aa6.57□□□□□ -1.36
NDE2YDL085W YPL278CQ08990 100 aa6.57□□□□□ -1.36
NDE2YDL085W MSL5Q12186 476 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
NDE2YDL085W CSF1Q12150 2958 aa6.56□□□□□ -1.36
NDE2YDL085W SUA7P29055 345 aaPredicted RBP6.56□□□□□ -1.36
NDE2YDL085W SRP21P32342 167 aa6.56□□□□□ -1.36
NDE2YDL085W FPR2P32472 135 aa6.56□□□□□ -1.36
NDE2YDL085W SOR1P35497 357 aaKnown RBP6.56□□□□□ -1.36
NDE2YDL085W YBR220CP38318 560 aa6.56□□□□□ -1.36
NDE2YDL085W YJR015WP47090 510 aa6.56□□□□□ -1.36
NDE2YDL085W MIC27P50945 234 aa6.56□□□□□ -1.36
NDE2YDL085W CRZ1P53968 678 aa6.56□□□□□ -1.36
NDE2YDL085W SHH3Q04487 196 aa6.56□□□□□ -1.36
NDE2YDL085W SOR2Q07786 357 aa6.56□□□□□ -1.36
NDE2YDL085W POM34Q12445 299 aa6.56□□□□□ -1.36
NDE2YDL085W YPR014CQ6B0W2 109 aa6.56□□□□□ -1.36
NDE2YDL085W STF1P01098 86 aa6.55□□□□□ -1.36
NDE2YDL085W YHL037CP38733 133 aa6.55□□□□□ -1.36
NDE2YDL085W DFG10P40526 253 aa6.55□□□□□ -1.36
NDE2YDL085W DYN2Q02647 92 aa6.55□□□□□ -1.36
NDE2YDL085W RPP2AP05319 106 aaKnown RBP6.54□□□□□ -1.36
NDE2YDL085W RPL31AP0C2H8 113 aaKnown RBP6.54□□□□□ -1.36
NDE2YDL085W RPL31BP0C2H9 113 aaKnown RBP6.54□□□□□ -1.36
NDE2YDL085W ATP10P18496 279 aa6.54□□□□□ -1.36
NDE2YDL085W SRP14P38985 146 aa6.54□□□□□ -1.36
NDE2YDL085W SAS2P40963 338 aa6.54□□□□□ -1.36
NDE2YDL085W YJL118WP47022 219 aa6.54□□□□□ -1.36
NDE2YDL085W SUR7P54003 302 aa6.54□□□□□ -1.36
NDE2YDL085W YDL218WQ07629 317 aa6.54□□□□□ -1.36
NDE2YDL085W RPS22BQ3E7Y3 130 aaKnown RBP6.54□□□□□ -1.36
NDE2YDL085W YOS1Q3E834 85 aa6.54□□□□□ -1.36
NDE2YDL085W RPI1P23250 407 aaKnown RBP6.54□□□□□ -1.36
NDE2YDL085W TOM40P23644 387 aaKnown RBP6.54□□□□□ -1.36
NDE2YDL085W YBR184WP38299 523 aa6.54□□□□□ -1.36
NDE2YDL085W CDC40P40968 455 aaPredicted RBP6.54□□□□□ -1.36
NDE2YDL085W DSK2P48510 373 aa6.54□□□□□ -1.36
NDE2YDL085W YDL183CP48569 320 aa6.54□□□□□ -1.36
NDE2YDL085W YNL046WP53956 172 aa6.54□□□□□ -1.36
NDE2YDL085W DFR1P07807 211 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
NDE2YDL085W RPS2P25443 254 aaKnown RBP6.53□□□□□ -1.36
NDE2YDL085W YKL102CP34249 101 aa6.53□□□□□ -1.36
NDE2YDL085W MIX23P38162 196 aa6.53□□□□□ -1.36
NDE2YDL085W YIL163CP40448 117 aa6.53□□□□□ -1.36
NDE2YDL085W DUG3P53871 357 aa6.53□□□□□ -1.36
NDE2YDL085W STD1Q02794 444 aa6.53□□□□□ -1.36
NDE2YDL085W GAT3Q07928 141 aa6.53□□□□□ -1.36
NDE2YDL085W RAD23P32628 398 aaKnown RBP6.52□□□□□ -1.37
NDE2YDL085W YKL187CP34231 750 aa6.52□□□□□ -1.37
NDE2YDL085W PAU16P35994 123 aa6.52□□□□□ -1.37
NDE2YDL085W PHD1P36093 366 aa6.52□□□□□ -1.37
NDE2YDL085W PIR5P46999 287 aa6.52□□□□□ -1.37
NDE2YDL085W IZH1Q03419 316 aa6.52□□□□□ -1.37
NDE2YDL085W YDR114CQ04597 100 aa6.52□□□□□ -1.37
NDE2YDL085W GEP5Q12393 293 aa6.52□□□□□ -1.37
NDE2YDL085W SEN1Q00416 2231 aaKnown RBP6.51□□□□□ -1.37
NDE2YDL085W SOD1P00445 154 aaKnown RBP6.51□□□□□ -1.37
NDE2YDL085W HMRA1P0CY11 126 aa6.51□□□□□ -1.37
NDE2YDL085W PRE1P22141 198 aaKnown RBP6.51□□□□□ -1.37
NDE2YDL085W DOG1P38774 246 aa6.51□□□□□ -1.37
NDE2YDL085W RPA43P46669 326 aa6.51□□□□□ -1.37
NDE2YDL085W BNA2P47125 453 aa6.51□□□□□ -1.37
NDE2YDL085W API2Q04413 109 aa6.51□□□□□ -1.37
NDE2YDL085W NAT5Q08689 176 aa6.51□□□□□ -1.37
NDE2YDL085W MRS3P10566 314 aa6.5□□□□□ -1.37
NDE2YDL085W AME1P38313 324 aa6.5□□□□□ -1.37
NDE2YDL085W YAR068WP39564 161 aa6.5□□□□□ -1.37
NDE2YDL085W YFL051CP43552 160 aa6.5□□□□□ -1.37
NDE2YDL085W CPD1P53314 239 aa6.5□□□□□ -1.37
NDE2YDL085W PKR1Q03880 122 aaKnown RBP6.5□□□□□ -1.37
NDE2YDL085W GIM5Q04493 163 aa6.5□□□□□ -1.37
NDE2YDL085W TRI1Q05024 226 aa6.5□□□□□ -1.37
NDE2YDL085W CNL1Q06333 122 aa6.5□□□□□ -1.37
NDE2YDL085W ERF2Q06551 359 aa6.5□□□□□ -1.37
NDE2YDL085W RPL39P04650 51 aa6.5□□□□□ -1.37
NDE2YDL085W HAP3P13434 144 aa6.5□□□□□ -1.37
NDE2YDL085W NOP1P15646 327 aaKnown RBP6.5□□□□□ -1.37
NDE2YDL085W HSP12P22943 109 aaKnown RBP6.5□□□□□ -1.37
NDE2YDL085W QRI5P32344 111 aa6.5□□□□□ -1.37
NDE2YDL085W PAM17P36147 197 aa6.5□□□□□ -1.37
NDE2YDL085W ICS2P38284 255 aa6.5□□□□□ -1.37
NDE2YDL085W YER134CP40081 178 aa6.5□□□□□ -1.37
NDE2YDL085W SGN1P40561 250 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
NDE2YDL085W YCR024C-BQ3E7Z8 88 aa6.5□□□□□ -1.37
NDE2YDL085W YMR316C-AI2HB70 103 aa6.49□□□□□ -1.37
NDE2YDL085W ADH2P00331 348 aaKnown RBP6.49□□□□□ -1.37
NDE2YDL085W YHR173CP38864 112 aa6.49□□□□□ -1.37
NDE2YDL085W YHP1Q04116 353 aa6.49□□□□□ -1.37
NDE2YDL085W TVP18Q04767 167 aa6.49□□□□□ -1.37
NDE2YDL085W POS5Q06892 414 aa6.49□□□□□ -1.37
NDE2YDL085W CSM4Q08955 156 aa6.49□□□□□ -1.37
NDE2YDL085W WTM2Q12206 467 aa6.49□□□□□ -1.37
NDE2YDL085W WSC3Q12215 556 aa6.49□□□□□ -1.37
NDE2YDL085W TPT1Q12272 230 aaKnown RBP6.49□□□□□ -1.37
NDE2YDL085W YMR105W-AQ8TGS8 64 aa6.49□□□□□ -1.37
NDE2YDL085W PIS1P06197 220 aaKnown RBP6.48□□□□□ -1.37
NDE2YDL085W YER190C-BP0CX94 160 aa6.48□□□□□ -1.37
NDE2YDL085W YEL077W-AP0CX95 160 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms