RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 PARM1Q6UWI2 310 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 LIMS2Q7Z4I7 341 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 OSTM1Q86WC4 334 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 SUGP1Q8IWZ8 645 aaKnown RBP16.13■□□□□ 0.17
PHGDH-231ENST00000641939 HS6ST3Q8IZP7 471 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 FBXL6Q8N531 539 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 ST13P5Q8NFI4 369 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-231ENST00000641939 FGF14Q92915 247 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 TCEAL4Q96EI5 215 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 GSDMAQ96QA5 445 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 SEPT5Q99719 369 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-231ENST00000641939 DNAJC25Q9H1X3 360 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 ABI2Q9NYB9 513 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-231ENST00000641939 PCDHB5Q9Y5E4 795 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 WDFY4Q6ZS81 3184 aa16.13■□□□□ 0.17
PHGDH-231ENST00000641939 PTPRDP23468 1912 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 LRRIQ3A6PVS8 624 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-231ENST00000641939 MAPK13O15264 365 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 NARSO43776 548 aaKnown RBP16.12■□□□□ 0.17
PHGDH-231ENST00000641939 PHACTR2O75167 634 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 SOAT2O75908 522 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 MYL4P12829 197 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 NR2F2P24468 414 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 ACAT1P24752 427 aaKnown RBP16.12■□□□□ 0.17
PHGDH-231ENST00000641939 PCSK1P29120 753 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 ANP32AP39687 249 aaKnown RBP16.12■□□□□ 0.17
PHGDH-231ENST00000641939 CDR1P51861 262 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 NFE2Q16621 373 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-231ENST00000641939 MGAT5BQ3V5L5 792 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 INTS6LQ5JSJ4 861 aaKnown RBP16.12■□□□□ 0.17
PHGDH-231ENST00000641939 ITIH5Q86UX2 942 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 SMYD4Q8IYR2 804 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-231ENST00000641939 MCRS1Q96EZ8 462 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 MMS19Q96T76 1030 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 TMLHEQ9NVH6 421 aa16.12■□□□□ 0.17
PHGDH-231ENST00000641939 ZNF638Q14966 1978 aaKnown RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 KINO60870 393 aaKnown RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 MOSPD3O75425 235 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 STAU1O95793 577 aaKnown RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 PDGFBP01127 241 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 HAPLN1P10915 354 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 SRFP11831 508 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 WARSP23381 471 aaKnown RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 RPL13P26373 211 aaKnown RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 ATICP31939 592 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 MYL6P60660 151 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 BIRC3Q13489 604 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 WDR72Q3MJ13 1102 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 ZCWPW2Q504Y3 356 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 TDRD10Q5VZ19 366 aaKnown RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 POTEHQ6S545 545 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 DNAJB7Q7Z6W7 309 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 TMC8Q8IU68 726 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 ELOA2Q8IYF1 753 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 SPATA20Q8TB22 786 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 FAM200AQ8TCP9 573 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 TMC2Q8TDI7 906 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 KBTBD7Q8WVZ9 684 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 SMARCE1Q969G3 411 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 PSMG2Q969U7 264 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 SYAP1Q96A49 352 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 RPP25Q9BUL9 199 aaKnown RBP16.11■□□□□ 0.17
PHGDH-231ENST00000641939 LRRC3Q9BY71 257 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 CHMP5Q9NZZ3 219 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 FBXL21Q9UKT6 434 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 PCDHA5Q9Y5H7 936 aa16.11■□□□□ 0.17
PHGDH-231ENST00000641939 GADD45BO75293 160 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-231ENST00000641939 AKAP3O75969 853 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 C4BPAP04003 597 aaKnown RBP16.1■□□□□ 0.17
PHGDH-231ENST00000641939 ATF6P18850 670 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 TNNC1P63316 161 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 DLG4P78352 724 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 ADAM9Q13443 819 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 VEPH1Q14D04 833 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 COBLL1Q53SF7 1204 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 ZNF658Q5TYW1 1059 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-231ENST00000641939 ERCC4Q92889 916 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-231ENST00000641939 PKMYT1Q99640 499 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 KXD1Q9BQD3 176 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 PI4K2AQ9BTU6 479 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 GTPBP4Q9BZE4 634 aaKnown RBP16.1■□□□□ 0.17
PHGDH-231ENST00000641939 XYLT2Q9H1B5 865 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 VRTNQ9H8Y1 702 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 ABCB6Q9NP58 842 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 WNT16Q9UBV4 365 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 GTF3C4Q9UKN8 822 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 OBSL1O75147 1896 aa16.1■□□□□ 0.17
PHGDH-231ENST00000641939 NUP210Q8TEM1 1887 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-231ENST00000641939 GREB1Q4ZG55 1949 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 CACNA1HO95180 2353 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 NRG2O14511 850 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-231ENST00000641939 IKBKBO14920 756 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 HCRTO43612 131 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 TACC1O75410 805 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 ECI2O75521 394 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 FGF19O95750 216 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 CFHP08603 1231 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 FAM163BP0C2L3 166 aa16.09■□□□□ 0.17
PHGDH-231ENST00000641939 GJA1P17302 382 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms