RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 SYN2Q92777 582 aaPredicted RBP11.06□□□□□ -0.64
CASC19-247ENST00000641642 LSM14BQ9BX40 385 aaKnown RBP11.06□□□□□ -0.64
CASC19-247ENST00000641642 NAA15Q9BXJ9 866 aaKnown RBP11.06□□□□□ -0.64
CASC19-247ENST00000641642 TTYH3Q9C0H2 523 aa11.06□□□□□ -0.64
CASC19-247ENST00000641642 PRO3102Q9H379 93 aa11.06□□□□□ -0.64
CASC19-247ENST00000641642 GOLGA2P5Q9HBQ8 144 aa11.06□□□□□ -0.64
CASC19-247ENST00000641642 SIX2Q9NPC8 291 aa11.06□□□□□ -0.64
CASC19-247ENST00000641642 SPG21Q9NZD8 308 aa11.06□□□□□ -0.64
CASC19-247ENST00000641642 CAPN11Q9UMQ6 739 aa11.06□□□□□ -0.64
CASC19-247ENST00000641642 SF3B1O75533 1304 aaKnown RBP eCLIP11.06□□□□□ -0.64
CASC19-247ENST00000641642 C5orf67F2Z3F1 127 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 NOL4O94818 638 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 ODC1P11926 461 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 LHX1P48742 406 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 SLC11A1P49279 550 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 GATMP50440 423 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 GUCY2FP51841 1108 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 BPIFB4P59827 614 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 ZBED6P86452 979 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 KRT17Q04695 432 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 UBE3AQ05086 875 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 BMS1Q14692 1282 aaKnown RBP11.05□□□□□ -0.64
CASC19-247ENST00000641642 FAM117BQ6P1L5 589 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 DSTYKQ6XUX3 929 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 METTL23Q86XA0 190 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 CNGA4Q8IV77 575 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 PARP9Q8IXQ6 854 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 SLC39A11Q8N1S5 342 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 PPM1KQ8N3J5 372 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 COLGALT1Q8NBJ5 622 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 TMEM169Q96HH4 297 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 IGSF21Q96ID5 467 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 SENP8Q96LD8 212 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 SPAG5Q96R06 1193 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 GANQ9H2C0 597 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 APOBEC3GQ9HC16 384 aaKnown RBP11.05□□□□□ -0.64
CASC19-247ENST00000641642 UBE2TQ9NPD8 197 aaPredicted RBP11.05□□□□□ -0.64
CASC19-247ENST00000641642 FAM207AQ9NSI2 230 aaPredicted RBP11.05□□□□□ -0.64
CASC19-247ENST00000641642 DNAJB4Q9UDY4 337 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 MSRAQ9UJ68 235 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 DNAJC12Q9UKB3 198 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 CNTN6Q9UQ52 1028 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 LZTS1Q9Y250 596 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 SSX2IPQ9Y2D8 614 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 LUC7L2Q9Y383 392 aaKnown RBP11.05□□□□□ -0.64
CASC19-247ENST00000641642 SNX9Q9Y5X1 595 aa11.05□□□□□ -0.64
CASC19-247ENST00000641642 MRPL42Q9Y6G3 142 aaKnown RBP11.05□□□□□ -0.64
CASC19-247ENST00000641642 CEP290O15078 2479 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 CYB561D2O14569 222 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 SPTLC1O15269 473 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 KIF4AO95239 1232 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 EFEMP2O95967 443 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 WARSP23381 471 aaKnown RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 BMPR1AP36894 532 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 ASPAP45381 313 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 GSDMDP57764 484 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 POLR2FP61218 127 aaKnown RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 SMAD3P84022 425 aaKnown RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 INCA1Q0VD86 236 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 TBX2Q13207 712 aaPredicted RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 ARID5BQ14865 1188 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 TIGD5Q53EQ6 642 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 FUT10Q6P4F1 479 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 CD300LGQ6UXG3 332 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 DDX53Q86TM3 631 aaKnown RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 DRC7Q8IY82 874 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 RNF168Q8IYW5 571 aaPredicted RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 C3orf58Q8NDZ4 430 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 SHC3Q92529 594 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 MMS19Q96T76 1030 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 PAAF1Q9BRP4 392 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 PI4K2AQ9BTU6 479 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 KLF16Q9BXK1 252 aaPredicted RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 MARCH5Q9NX47 278 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 PUF60Q9UHX1 559 aaKnown RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 KIAA1257Q9ULG3 409 aa11.04□□□□□ -0.64
CASC19-247ENST00000641642 BARX2Q9UMQ3 279 aaPredicted RBP11.04□□□□□ -0.64
CASC19-247ENST00000641642 LINC01553A4QN01 128 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 CFAP99D6REC4 459 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 H3BM21 787 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 H7C4K7 107 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 GABRDO14764 452 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 PPEF2O14830 753 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 B4GALT3O60512 393 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 CLSTN1O94985 981 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 OAZ2O95190 189 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 SOD2P04179 222 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 GYPCP04921 128 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 LINC00271P0C7V0 271 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 FGFR3P22607 806 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
CASC19-247ENST00000641642 PCSK1P29120 753 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 HNRNPH3P31942 346 aaKnown RBP11.03□□□□□ -0.64
CASC19-247ENST00000641642 STAT1P42224 750 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 JAM2P57087 298 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 ERVK-21P61565 698 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 CREMQ03060 361 aa11.03□□□□□ -0.64
CASC19-247ENST00000641642 SMARCB1Q12824 385 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms