RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	ATAD1	Q8NBU5	361 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	KIF12	Q96FN5	646 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	CCDC34	Q96HJ3	373 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	MMTAG2	Q9BU76	263 aa	Known RBP	10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	SMG9	Q9H0W8	520 aa	Known RBP	10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	NUP62CL	Q9H1M0	184 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	ARRDC1-AS1	Q9H2J1	176 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	HPSE	Q9Y251	543 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	ASPM	Q8IZT6	3477 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587		A0A087X0B3	334 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	FAM237A	A0A1B0GTK4	181 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	TOM1L1	O75674	476 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	OAZ2	O95190	189 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	PAPSS2	O95340	614 aa	Predicted RBP	10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	GABRR2	P28476	465 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	AARS	P49588	968 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	CACNB1	Q02641	598 aa	Predicted RBP	10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	CCIN	Q13939	588 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	AASDH	Q4L235	1098 aa	Predicted RBP	10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	CCDC183	Q5T5S1	534 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	GPR158	Q5T848	1215 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	CENPP	Q6IPU0	288 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	WDR5B	Q86VZ2	330 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	IQUB	Q8NA54	791 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	TMEM161B	Q8NDZ6	487 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	ENGASE	Q8NFI3	743 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	DRC1	Q96MC2	740 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	LPIN3	Q9BQK8	851 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	GPR88	Q9GZN0	384 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	GZF1	Q9H116	711 aa	Predicted RBP	10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	ATXN3L	Q9H3M9	355 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	CLSTN2	Q9H4D0	955 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	USP25	Q9UHP3	1055 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	SERTAD1	Q9UHV2	236 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	DNM3	Q9UQ16	869 aa		10.85	□□□□□ -0.67
PHGDH-222	ENST00000641587	WDFY3	Q8IZQ1	3526 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	SCN1A	P35498	2009 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	NPHP3-ACAD11	A0A0J9YXS1	232 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	TTC26	A0AVF1	554 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	DPYSL4	O14531	572 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	SLC26A4	O43511	780 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	MAPT	P10636	758 aa	Known RBP	10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	PML	P29590	882 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	LRPAP1	P30533	357 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	CNR2	P34972	360 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	MATR3	P43243	847 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	ALDH1A3	P47895	512 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	EPHB3	P54753	998 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	MLLT6	P55198	1093 aa	Predicted RBP	10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	MCL1	Q07820	350 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	STRN3	Q13033	797 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	GPR17	Q13304	367 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	PLD1	Q13393	1074 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	ZBTB6	Q15916	424 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	CAMK4	Q16566	473 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	NAIF1	Q69YI7	327 aa	Predicted RBP	10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	IL31	Q6EBC2	164 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	OVOS1	Q6IE37	1185 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	DSTYK	Q6XUX3	929 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	KRBA2	Q6ZNG9	492 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	USP37	Q86T82	979 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	KBTBD6	Q86V97	674 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	RALGPS2	Q86X27	583 aa	Predicted RBP	10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	OR10T2	Q8NGX3	314 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	FAM200A	Q8TCP9	573 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	PSMG2	Q969U7	264 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	E2F7	Q96AV8	911 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	CHFR	Q96EP1	664 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	MSANTD3	Q96H12	275 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	PNMA5	Q96PV4	448 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	TNMD	Q9H2S6	317 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	TMEM63C	Q9P1W3	806 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	HOOK1	Q9UJC3	728 aa	Known RBP	10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	MAFF	Q9ULX9	164 aa		10.84	□□□□□ -0.67
PHGDH-222	ENST00000641587	ZNF638	Q14966	1978 aa	Known RBP	10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	OBSL1	O75147	1896 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	OTOL1	A6NHN0	477 aa	Predicted RBP	10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	OR6C75	A6NL08	312 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	LACTBL1	A8MY62	500 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	CLDN3	O15551	220 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	ACTN4	O43707	911 aa	Known RBP	10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	SLFN14	P0C7P3	912 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	ATF6	P18850	670 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	AFM	P43652	599 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	DHX8	Q14562	1220 aa	Known RBP	10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	ENOX2	Q16206	610 aa	Known RBP	10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	TMEM119	Q4V9L6	283 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	ARHGAP29	Q52LW3	1261 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	DGKK	Q5KSL6	1271 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	TRIM68	Q6AZZ1	485 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	TCEAL6	Q6IPX3	200 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	C12orf50	Q8NA57	414 aa	Predicted RBP	10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	STKLD1	Q8NE28	680 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	RIN3	Q8TB24	985 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	BPIFB1	Q8TDL5	484 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	SPIRE2	Q8WWL2	714 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	TCEAL3	Q969E4	200 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms