RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ANKRD62A6NC57 917 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 PI4K2BG5E9Z4 385 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 THAP12O43422 761 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 BUB1O43683 1085 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 FTLP02792 175 aaPredicted RBP13.96□□□□□ -0.17
PHGDH-221ENST00000641573 PFKMP08237 780 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 IBSPP21815 317 aaPredicted RBP13.96□□□□□ -0.17
PHGDH-221ENST00000641573 MLH1P40692 756 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 ZNF394Q53GI3 561 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 ACAD10Q6JQN1 1059 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 AGMOQ6ZNB7 445 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 RNF169Q8NCN4 708 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 CTNNBL1Q8WYA6 563 aaPredicted RBP13.96□□□□□ -0.17
PHGDH-221ENST00000641573 ZNF560Q96MR9 790 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 MMS19Q96T76 1030 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 NAPGQ99747 312 aaPredicted RBP13.96□□□□□ -0.17
PHGDH-221ENST00000641573 WNT8AQ9H1J5 351 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 RGS18Q9NS28 235 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 SLC38A7Q9NVC3 462 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 MIOSQ9NXC5 875 aa13.96□□□□□ -0.17
PHGDH-221ENST00000641573 NCANO14594 1321 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 A0A0A6YYK5 440 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-221ENST00000641573 FAM170AA1A519 330 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 ARL5CA6NH57 179 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 CILPO75339 1184 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 URI1O94763 535 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-221ENST00000641573 ABCB4P21439 1286 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 LRPAP1P30533 357 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 PNPLA4P41247 253 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 TRIM72Q6ZMU5 477 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 RTN4RL1Q86UN2 441 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-221ENST00000641573 ECHDC2Q86YB7 292 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 TTC39CQ8N584 583 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 GSTCDQ8NEC7 633 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 TRIM58Q8NG06 486 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 WHAMMQ8TF30 809 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 ZNF606Q8WXB4 792 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 SCLYQ96I15 445 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 ALS2CR12Q96Q35 445 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 FAM124BQ9H5Z6 455 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-221ENST00000641573 RSAD1Q9HA92 442 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 GOLGA2P5Q9HBQ8 144 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 UBN1Q9NPG3 1134 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 SNX9Q9Y5X1 595 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 CAPN6Q9Y6Q1 641 aa13.95□□□□□ -0.18
PHGDH-221ENST00000641573 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 RIOK3O14730 519 aaKnown RBP13.94□□□□□ -0.18
PHGDH-221ENST00000641573 CYP1A1P04798 512 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-221ENST00000641573 THP07101 528 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 CFHP08603 1231 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 PAEPP09466 180 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 UNGP13051 313 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-221ENST00000641573 CD19P15391 556 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 BRD2P25440 801 aaKnown RBP13.94□□□□□ -0.18
PHGDH-221ENST00000641573 NOP2P46087 812 aaKnown RBP13.94□□□□□ -0.18
PHGDH-221ENST00000641573 TAF6P49848 677 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 SCNN1GP51170 649 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 RAD23BP54727 409 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 GPC5P78333 572 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 INCA1Q0VD86 236 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 PDCD11Q14690 1871 aaKnown RBP13.94□□□□□ -0.18
PHGDH-221ENST00000641573 IFI16Q16666 785 aaKnown RBP13.94□□□□□ -0.18
PHGDH-221ENST00000641573 SV2CQ496J9 727 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 ZNF598Q86UK7 904 aaKnown RBP13.94□□□□□ -0.18
PHGDH-221ENST00000641573 LINC01599Q8WXQ3 324 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 ARHGEF26Q96DR7 871 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 CYFIP2Q96F07 1278 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 TWNKQ96RR1 684 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 SLC9A7Q96T83 725 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 ZSWIM1Q9BR11 485 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 FTHL17Q9BXU8 183 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 ELOVL4Q9GZR5 314 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 THAP2Q9H0W7 228 aa13.94□□□□□ -0.18
PHGDH-221ENST00000641573 BARX2Q9UMQ3 279 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-221ENST00000641573 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-221ENST00000641573 KPNA7A9QM74 516 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 C9IYK1 514 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 SPTLC1O15269 473 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 NBNO60934 754 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 PALMO75781 387 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 ALADP13716 330 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 SSTR3P32745 418 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-221ENST00000641573 AFF1P51825 1210 aaKnown RBP13.93□□□□□ -0.18
PHGDH-221ENST00000641573 NDST1P52848 882 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 ORC1Q13415 861 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 GPNMBQ14956 572 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 NAA35Q5VZE5 725 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 SLC24A5Q71RS6 500 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 DEFB128Q7Z7B8 93 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 PASD1Q8IV76 773 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 SLC4A11Q8NBS3 891 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 RFFLQ8WZ73 363 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 TFAP2BQ92481 460 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 TMEM176AQ96HP8 235 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 MRPL45Q9BRJ2 306 aaKnown RBP13.93□□□□□ -0.18
PHGDH-221ENST00000641573 L2HGDHQ9H9P8 463 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 GDAP2Q9NXN4 497 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 HMGXB4Q9UGU5 601 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 PCDHGC5Q9Y5F6 944 aa13.93□□□□□ -0.18
PHGDH-221ENST00000641573 GRID2IPA4D2P6 1211 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms