RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 VARS2Q5ST30 1063 aaKnown RBP13.81□□□□□ -0.2
PHGDH-218ENST00000641491 SMYD5Q6GMV2 418 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 PDE12Q6L8Q7 609 aaKnown RBP13.81□□□□□ -0.2
PHGDH-218ENST00000641491 C4orf50Q6ZRC1 276 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 LMO3Q8TAP4 145 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 ELMO3Q96BJ8 720 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 ARID3AQ99856 593 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 TCF25Q9BQ70 676 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 GANQ9H2C0 597 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 NGRNQ9NPE2 291 aaKnown RBP13.81□□□□□ -0.2
PHGDH-218ENST00000641491 TLR9Q9NR96 1032 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 HESX1Q9UBX0 185 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 RAPGEFL1Q9UHV5 662 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 CDH9Q9ULB4 789 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 CAPN11Q9UMQ6 739 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 YBX2Q9Y2T7 364 aaKnown RBP13.81□□□□□ -0.2
PHGDH-218ENST00000641491 COL4A6Q14031 1691 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 TDRD15B5MCY1 1934 aaKnown RBP13.8□□□□□ -0.2
PHGDH-218ENST00000641491 LRRC53A6NM62 1247 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 F8W810 466 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 THAP12O43422 761 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 GFPT2O94808 682 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 CYP11A1P05108 521 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 PDGFRBP09619 1106 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 GNA15P30679 374 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 ELF1P32519 619 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 PBX1P40424 430 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 NDST1P52848 882 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 CDH8P55286 799 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 APBA1Q02410 837 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 TAP1Q03518 808 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 KLHL30Q0D2K2 578 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 STILQ15468 1287 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 SGO2Q562F6 1265 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 PLPP4Q5VZY2 271 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 SPATA2LQ8IUW3 424 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-218ENST00000641491 TMEM130Q8N3G9 435 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 MSANTD4Q8NCY6 345 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 OR8K1Q8NGG5 319 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 POF1BQ8WVV4 589 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 TMEM176AQ96HP8 235 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 SYT15Q9BQS2 421 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 MRPL45Q9BRJ2 306 aaKnown RBP13.8□□□□□ -0.2
PHGDH-218ENST00000641491 GPR62Q9BZJ7 368 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 CERS4Q9HA82 394 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 SIX2Q9NPC8 291 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 KIAA1257Q9ULG3 409 aa13.8□□□□□ -0.2
PHGDH-218ENST00000641491 BZW2Q9Y6E2 419 aaKnown RBP13.8□□□□□ -0.2
PHGDH-218ENST00000641491 C5orf67F2Z3F1 127 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 AP5Z1O43299 807 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 MFAP3LO75121 409 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 CILPO75339 1184 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 GYPCP04921 128 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 ADH1AP07327 375 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 PAEPP09466 180 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 FGFR3P22607 806 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 CYP27A1Q02318 531 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 INCA1Q0VD86 236 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 SMARCB1Q12824 385 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 NFE2Q16621 373 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-218ENST00000641491 TMEM173Q86WV6 379 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-218ENST00000641491 SHC3Q92529 594 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 KAT5Q92993 513 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 FAM122AQ96E09 287 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 ACBD6Q9BR61 282 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 LMAN2LQ9H0V9 348 aa13.79□□□□□ -0.2
PHGDH-218ENST00000641491 ALG13Q9NP73 1137 aaKnown RBP13.79□□□□□ -0.2
PHGDH-218ENST00000641491 CXCL14O95715 111 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 SRGAP2BP0DMP2 458 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 CTSAP10619 480 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 VDRP11473 427 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 ACAT1P24752 427 aaKnown RBP13.78□□□□□ -0.2
PHGDH-218ENST00000641491 ANXA13P27216 316 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 NDUFV1P49821 464 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 PSMC1P62191 440 aaKnown RBP13.78□□□□□ -0.2
PHGDH-218ENST00000641491 DSG1Q02413 1049 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 SLC39A12Q504Y0 691 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 MDH1BQ5I0G3 518 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 INTS6LQ5JSJ4 861 aaKnown RBP13.78□□□□□ -0.2
PHGDH-218ENST00000641491 ACOT1Q86TX2 421 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 B3GALNT2Q8NCR0 500 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 BCL7CQ8WUZ0 217 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-218ENST00000641491 PIK3R5Q8WYR1 880 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 KREMEN1Q96MU8 473 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 NOX5Q96PH1 765 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.78□□□□□ -0.2
PHGDH-218ENST00000641491 LUC7LQ9NQ29 371 aaKnown RBP13.78□□□□□ -0.2
PHGDH-218ENST00000641491 ABHD10Q9NUJ1 306 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 DPP7Q9UHL4 492 aa13.78□□□□□ -0.2
PHGDH-218ENST00000641491 H3BNC9 293 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 FOXN3O00409 490 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-218ENST00000641491 EPHB6O15197 1021 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 CYP26A1O43174 497 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 NOL4O94818 638 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 OAZ2O95190 189 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 SERPING1P05155 500 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 ANK1P16157 1881 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 KLRC2P26717 231 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 ADKP55263 362 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms