RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 DIS3LQ8TF46 1054 aaKnown RBP6.61□□□□□ -1.35
RGPD1-206ENST00000641458 PPP1R13BQ96KQ4 1090 aa6.61□□□□□ -1.35
RGPD1-206ENST00000641458 PCDHB18PQ96TA0 734 aa6.61□□□□□ -1.35
RGPD1-206ENST00000641458 ELOVL4Q9GZR5 314 aa6.61□□□□□ -1.35
RGPD1-206ENST00000641458 TSKSQ9UJT2 592 aa6.61□□□□□ -1.35
RGPD1-206ENST00000641458 MUC22E2RYF6 1773 aaPredicted RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 ZNF135P52742 658 aaPredicted RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 IKBKEQ14164 716 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 ZNF699Q32M78 642 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 KIAA0319Q5VV43 1072 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 DDX53Q86TM3 631 aaKnown RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 C3orf58Q8NDZ4 430 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 FATE1Q969F0 183 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 HES6Q96HZ4 224 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 MYRFLQ96LU7 910 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 FAM49AQ9H0Q0 323 aaPredicted RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 LUC7LQ9NQ29 371 aaKnown RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 RRN3Q9NYV6 651 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 TUBGCP4Q9UGJ1 667 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 L1RE1Q9UN81 338 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 COL4A3Q01955 1670 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 B4GALT3O60512 393 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 ETF1P62495 437 aaKnown RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 DSG1Q02413 1049 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 CLUL1Q15846 466 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 RFFLQ8WZ73 363 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 TRMT2BQ96GJ1 504 aaKnown RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 SLC2A13Q96QE2 648 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 NRDE2Q9H7Z3 1164 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 GOLGA8IPA6NC78 632 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 GOLGA8JA6NMD2 632 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 XPO1O14980 1071 aaKnown RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 FANCGO15287 622 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 PIK3CAP42336 1068 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 PTPN9P43378 593 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 TNK2Q07912 1038 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 C5orf22Q49AR2 442 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 SCARA3Q6AZY7 606 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 TMEM184AQ6ZMB5 413 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 PDCL2Q8N4E4 241 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 C3orf20Q8ND61 904 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 SLCO2A1Q92959 643 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 KIF12Q96FN5 646 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 PAWRQ96IZ0 340 aaKnown RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 GDF15Q99988 308 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 UBE2TQ9NPD8 197 aaPredicted RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 ANKFY1Q9P2R3 1169 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 STRIP2Q9ULQ0 834 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 SSX2IPQ9Y2D8 614 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 PCDHA13Q9Y5I0 950 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 ZNF189O75820 626 aaPredicted RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 GABBR2O75899 941 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 ITGB3P05106 788 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 GHRP10912 638 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 HTR7P34969 479 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 EIF4A3P38919 411 aaKnown RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 TUBP50607 506 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 EPHA5P54756 1037 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 ADKP55263 362 aaKnown RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 ARMC3Q5W041 872 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 MSANTD2Q6P1R3 559 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 KLHDC10Q6PID8 442 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 GLB1LQ6UWU2 654 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 VSTM1Q6UX27 236 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 RRAGAQ7L523 313 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 MCOLN2Q8IZK6 566 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 RBBP8NLQ8NC74 664 aaPredicted RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 MYCBPAPQ8TBZ2 947 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 EEF2KMTQ96G04 330 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 HTATIP2Q9BUP3 242 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 IMPG2Q9BZV3 1241 aa6.6□□□□□ -1.35
RGPD1-206ENST00000641458 ZNF106Q9H2Y7 1883 aaKnown RBP6.6□□□□□ -1.35
RGPD1-206ENST00000641458 PODXLO00592 558 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 LRRN2O75325 713 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 TFRCP02786 760 aaKnown RBP6.59□□□□□ -1.35
RGPD1-206ENST00000641458 GALTP07902 379 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 LAG3P18627 525 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 TNNI1P19237 187 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 PPM1AP35813 382 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 SLC1A1P43005 524 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 ACADSBP45954 432 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 ARSEP51690 589 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 DCAF17Q5H9S7 520 aaPredicted RBP6.59□□□□□ -1.35
RGPD1-206ENST00000641458 TPGS2Q68CL5 300 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 SLC26A9Q7LBE3 791 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 NT5C1AQ9BXI3 368 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 MMRN2Q9H8L6 949 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 LMCD1Q9NZU5 365 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 SF3B1O75533 1304 aaKnown RBP eCLIP6.59□□□□□ -1.35
RGPD1-206ENST00000641458 GFRA2O00451 464 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 SORBS3O60504 671 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 DDHD2O94830 711 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 GJB5O95377 273 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 POLR2BP30876 1174 aaKnown RBP6.59□□□□□ -1.35
RGPD1-206ENST00000641458 SCAPQ12770 1279 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 LILRA6Q6PI73 481 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 VPS36Q86VN1 386 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 THNSL1Q8IYQ7 743 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 KAT5Q92993 513 aa6.59□□□□□ -1.35
RGPD1-206ENST00000641458 AZIN2Q96A70 460 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms