RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 SF3B1O75533 1304 aaKnown RBP eCLIP21.1■□□□□ 0.973e-6■■■■■ 100.2
PHGDH-210ENST00000641115 KIAA1671Q9BY89 1806 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 CARNS1A5YM72 827 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 GABRDO14764 452 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 ZNF263O14978 683 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 CYP11A1P05108 521 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 TYMPP19971 482 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 SGO2Q562F6 1265 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 C10orf76Q5T2E6 689 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 ALKBH5Q6P6C2 394 aaKnown RBP21.1■□□□□ 0.97
PHGDH-210ENST00000641115 TRIM72Q6ZMU5 477 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 KIAA1328Q86T90 577 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 ACOT1Q86TX2 421 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 CCAR2Q8N163 923 aaKnown RBP21.1■□□□□ 0.97
PHGDH-210ENST00000641115 TXLNBQ8N3L3 684 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 OLIG1Q8TAK6 271 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 PHOSPHO2Q8TCD6 241 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 MARCH5Q9NX47 278 aa21.1■□□□□ 0.97
PHGDH-210ENST00000641115 DDX43Q9NXZ2 648 aaKnown RBP21.1■□□□□ 0.97
PHGDH-210ENST00000641115 TIMM13Q9Y5L4 95 aaPredicted RBP21.1■□□□□ 0.97
PHGDH-210ENST00000641115 ESPNB1AK53 854 aa21.09■□□□□ 0.97
PHGDH-210ENST00000641115 PDGFRBP09619 1106 aa21.09■□□□□ 0.97
PHGDH-210ENST00000641115 LAG3P18627 525 aa21.09■□□□□ 0.97
PHGDH-210ENST00000641115 PBX3P40426 434 aa21.09■□□□□ 0.97
PHGDH-210ENST00000641115 ELAVL2Q12926 359 aaKnown RBP21.09■□□□□ 0.97
PHGDH-210ENST00000641115 CCDC122Q5T0U0 273 aa21.09■□□□□ 0.97
PHGDH-210ENST00000641115 OSTM1Q86WC4 334 aa21.09■□□□□ 0.97
PHGDH-210ENST00000641115 TFAP2BQ92481 460 aa21.09■□□□□ 0.97
PHGDH-210ENST00000641115 REXO2Q9Y3B8 237 aaKnown RBP21.09■□□□□ 0.97
PHGDH-210ENST00000641115 NME7Q9Y5B8 376 aa21.09■□□□□ 0.97
PHGDH-210ENST00000641115 PCDHA13Q9Y5I0 950 aa21.09■□□□□ 0.97
PHGDH-210ENST00000641115 NT5C1B-RDH14C9J2C7 533 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 LMO2P25791 158 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 PCSK1P29120 753 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 MAGEA1P43355 309 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 HTRA4P83105 476 aaPredicted RBP21.08■□□□□ 0.97
PHGDH-210ENST00000641115 OVOS1Q6IE37 1185 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 CRYBG2Q8N1P7 616 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 ZNF558Q96NG5 402 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 DPEP3Q9H4B8 488 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 KCND1Q9NSA2 647 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 TRMT1Q9NXH9 659 aaKnown RBP21.08■□□□□ 0.97
PHGDH-210ENST00000641115 PCDHGC3Q9UN70 934 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 INSL6Q9Y581 213 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 CEP83Q9Y592 693 aa21.08■□□□□ 0.97
PHGDH-210ENST00000641115 MRPL42Q9Y6G3 142 aaKnown RBP21.08■□□□□ 0.97
PHGDH-210ENST00000641115 SYN3O14994 580 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 ATP2A2P16615 1042 aaKnown RBP21.07■□□□□ 0.96
PHGDH-210ENST00000641115 VAV2P52735 878 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 YWHAHQ04917 246 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-210ENST00000641115 STILQ15468 1287 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 FUT10Q6P4F1 479 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 KCNT2Q6UVM3 1135 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 PALB2Q86YC2 1186 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 HERC6Q8IVU3 1022 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 THEM5Q8N1Q8 247 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 C17orf53Q8N3J3 647 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-210ENST00000641115 PCDHB18PQ96TA0 734 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 NENFQ9UMX5 172 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 VWA8A3KMH1 1905 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 GOLGA6L9A6NEM1 432 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 TMCO5BA8MYB1 307 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 HCRTO43612 131 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 GZMAP12544 262 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 ACAT1P24752 427 aaKnown RBP21.07■□□□□ 0.96
PHGDH-210ENST00000641115 PASD1Q8IV76 773 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 B3GALNT2Q8NCR0 500 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 ZSWIM1Q9BR11 485 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 AAASQ9NRG9 546 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 CDH9Q9ULB4 789 aa21.07■□□□□ 0.96
PHGDH-210ENST00000641115 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.07■□□□□ 0.96
PHGDH-210ENST00000641115 LSM8O95777 96 aaKnown RBP21.06■□□□□ 0.96
PHGDH-210ENST00000641115 TKTP29401 623 aaKnown RBP21.06■□□□□ 0.96
PHGDH-210ENST00000641115 SSTR3P32745 418 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-210ENST00000641115 MAGEA10P43363 369 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-210ENST00000641115 PSMC1P62191 440 aaKnown RBP21.06■□□□□ 0.96
PHGDH-210ENST00000641115 CNGA2Q16280 664 aa21.06■□□□□ 0.96
PHGDH-210ENST00000641115 CLEC16AQ2KHT3 1053 aa21.06■□□□□ 0.96
PHGDH-210ENST00000641115 FAM171A1Q5VUB5 890 aa21.06■□□□□ 0.96
PHGDH-210ENST00000641115 PPP1R2P3Q6NXS1 205 aa21.06■□□□□ 0.96
PHGDH-210ENST00000641115 TMEM173Q86WV6 379 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-210ENST00000641115 C12orf29Q8N999 325 aa21.06■□□□□ 0.96
PHGDH-210ENST00000641115 PPP1R13BQ96KQ4 1090 aa21.06■□□□□ 0.96
PHGDH-210ENST00000641115 SYT15Q9BQS2 421 aa21.06■□□□□ 0.96
PHGDH-210ENST00000641115 FAM49BQ9NUQ9 324 aa21.06■□□□□ 0.96
PHGDH-210ENST00000641115 USP27XA6NNY8 438 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 O00370 1275 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 RTN2O75298 545 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 CYP1A1P04798 512 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-210ENST00000641115 FIBCD1Q8N539 461 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 COLGALT1Q8NBJ5 622 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 TMEM35BQ8NCS4 154 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 CYFIP2Q96F07 1278 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 IGSF21Q96ID5 467 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 RAD9AQ99638 391 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 ACBD6Q9BR61 282 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 GPR62Q9BZJ7 368 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 ATP8B3O60423 1300 aa21.05■□□□□ 0.96
PHGDH-210ENST00000641115 M0QYV0 167 aa21.04■□□□□ 0.96
PHGDH-210ENST00000641115 TLL1O43897 1013 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms