RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 FAM163BP0C2L3 166 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 LTBRP36941 435 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 KCNMA1Q12791 1236 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 ORC1Q13415 861 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 COL19A1Q14993 1142 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 EXOC3L4Q17RC7 722 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 CTC1Q2NKJ3 1217 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 INTS6LQ5JSJ4 861 aaKnown RBP14.11□□□□□ -0.15
GTF3A-209ENST00000640289 PHLDB3Q6NSJ2 640 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 TRIM65Q6PJ69 517 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 RRAGAQ7L523 313 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 PPFIBP1Q86W92 1011 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 ANKRD20A12PQ8NF67 263 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 ZNF461Q8TAF7 563 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 FEZF2Q8TBJ5 459 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 SPATA18Q8TC71 538 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 KAT5Q92993 513 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 PABPC5Q96DU9 382 aaKnown RBP14.11□□□□□ -0.15
GTF3A-209ENST00000640289 NT5C1BQ96P26 610 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 PGLYRP2Q96PD5 576 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 SYT15Q9BQS2 421 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 ACBD6Q9BR61 282 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 OXCT2Q9BYC2 517 aaPredicted RBP14.11□□□□□ -0.15
GTF3A-209ENST00000640289 MAN1C1Q9NR34 630 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 CLEC1BQ9P126 229 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 FBXW11Q9UKB1 542 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 PRRC2BQ5JSZ5 2229 aaKnown RBP14.11□□□□□ -0.15
GTF3A-209ENST00000640289 MYBPHLA2RUH7 354 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 GTPBP10A4D1E9 387 aaKnown RBP14.1□□□□□ -0.15
GTF3A-209ENST00000640289 MTMR11A4FU01 709 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 GOLGA6L19H0YKK7 550 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 SEC24AO95486 1093 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 TPM2P07951 284 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 PON1P27169 355 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 PCSK1P29120 753 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 NDST1P52848 882 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 ADCY1Q08828 1119 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 GPR17Q13304 367 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 CUL2Q13617 745 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 GJB7Q6PEY0 223 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 PPM1KQ8N3J5 372 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 C12orf76Q8N812 135 aaPredicted RBP14.1□□□□□ -0.15
GTF3A-209ENST00000640289 KREMEN2Q8NCW0 462 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 WHAMMQ8TF30 809 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 CASP10Q92851 521 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 TWNKQ96RR1 684 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 PKMYT1Q99640 499 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 APOL5Q9BWW9 433 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 CYP3A43Q9HB55 503 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 SIX2Q9NPC8 291 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 CRTAC1Q9NQ79 661 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 GTF3C4Q9UKN8 822 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 CDH9Q9ULB4 789 aa14.1□□□□□ -0.15
GTF3A-209ENST00000640289 MYO9BQ13459 2157 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 LGALS16A8MUM7 142 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 NCK2O43639 380 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 CILPO75339 1184 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 ATF2P15336 505 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 KLK7P49862 253 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 TPM4P67936 248 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 TSPY1Q01534 308 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 INCA1Q0VD86 236 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 PTPN21Q16825 1174 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 ZNF394Q53GI3 561 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 FKBP15Q5T1M5 1219 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 DPY19L2P1Q6NXN4 242 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 ANKRD54Q6NXT1 300 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 TMEM184AQ6ZMB5 413 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 DCP1BQ8IZD4 617 aaKnown RBP14.09□□□□□ -0.15
GTF3A-209ENST00000640289 TTC9BQ8N6N2 239 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 UBR7Q8N806 425 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 ATAD1Q8NBU5 361 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 CRISPLD1Q9H336 500 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 UBE2ZQ9H832 354 aaPredicted RBP14.09□□□□□ -0.15
GTF3A-209ENST00000640289 CYP4F11Q9HBI6 524 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 CISHQ9NSE2 258 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 AFF4Q9UHB7 1163 aaKnown RBP14.09□□□□□ -0.15
GTF3A-209ENST00000640289 AJAP1Q9UKB5 411 aaPredicted RBP14.09□□□□□ -0.15
GTF3A-209ENST00000640289 MYO7AQ13402 2215 aa14.09□□□□□ -0.15
GTF3A-209ENST00000640289 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.08□□□□□ -0.16
GTF3A-209ENST00000640289 FSD2A1L4K1 749 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 H3BQ06 376 aaPredicted RBP14.08□□□□□ -0.16
GTF3A-209ENST00000640289 TEX33O43247 280 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 RFPL2O75678 378 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 PTPN1P18031 435 aaKnown RBP14.08□□□□□ -0.16
GTF3A-209ENST00000640289 TBXAS1P24557 533 aaPredicted RBP14.08□□□□□ -0.16
GTF3A-209ENST00000640289 GCNT1Q02742 428 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 UBXN1Q04323 297 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 CLUL1Q15846 466 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 MDH1BQ5I0G3 518 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 TPGS2Q68CL5 300 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 FAM171BQ6P995 826 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 SYCE2Q6PIF2 218 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 ACOT1Q86TX2 421 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 GAS2L3Q86XJ1 694 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 SLC7A14Q8TBB6 771 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 HLA-CQ95604 372 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 FAXDC2Q96IV6 333 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 KREMEN1Q96MU8 473 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms