RNA–Protein interactions for RNA: ENST00000640242.1

PAX6-266, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-266ENST00000640242 NT5C1AQ9BXI3 368 aa12.33□□□□□ -0.44
PAX6-266ENST00000640242 KRTAP3-3Q9BYR6 98 aa12.33□□□□□ -0.44
PAX6-266ENST00000640242 KRTAP3-2Q9BYR7 98 aa12.33□□□□□ -0.44
PAX6-266ENST00000640242 SMYD3Q9H7B4 428 aa12.33□□□□□ -0.44
PAX6-266ENST00000640242 WDR35Q9P2L0 1181 aa12.33□□□□□ -0.44
PAX6-266ENST00000640242 ANAPC7Q9UJX3 599 aa12.33□□□□□ -0.44
PAX6-266ENST00000640242 ST3GAL5Q9UNP4 418 aa12.33□□□□□ -0.44
PAX6-266ENST00000640242 PDE2AO00408 941 aaPredicted RBP12.32□□□□□ -0.44
PAX6-266ENST00000640242 ATP8B1O43520 1251 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 CHRNA1P02708 482 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 INHAP05111 366 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 RHOXF2BP0C7M4 288 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 COMTP21964 271 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 RRM1P23921 792 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 AKAP5P24588 427 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 BRD2P25440 801 aaKnown RBP12.32□□□□□ -0.44
PAX6-266ENST00000640242 GRK4P32298 578 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 MAN1A1P33908 653 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 MLLT3P42568 568 aaPredicted RBP12.32□□□□□ -0.44
PAX6-266ENST00000640242 TAF6P49848 677 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 C2orf54Q08AI8 447 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 NFX1Q12986 1120 aaKnown RBP12.32□□□□□ -0.44
PAX6-266ENST00000640242 PAK2Q13177 524 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 CNGA2Q16280 664 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 FAM26DQ5JW98 314 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 FBXO47Q5MNV8 452 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 SEL1L2Q5TEA6 688 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 C9orf57Q5W0N0 161 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 PLEKHA7Q6IQ23 1121 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 C8orf74Q6P047 294 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 PASD1Q8IV76 773 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 SLC4A11Q8NBS3 891 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 NOA1Q8NC60 698 aaKnown RBP12.32□□□□□ -0.44
PAX6-266ENST00000640242 HNRNPLLQ8WVV9 542 aaKnown RBP12.32□□□□□ -0.44
PAX6-266ENST00000640242 PGBD4Q96DM1 585 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 HEXIM2Q96MH2 286 aaKnown RBP12.32□□□□□ -0.44
PAX6-266ENST00000640242 ZMAT2Q96NC0 199 aaKnown RBP12.32□□□□□ -0.44
PAX6-266ENST00000640242 RHOXF2Q9BQY4 288 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 ZSWIM1Q9BR11 485 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 C11orf70Q9BRQ4 267 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 TRAIPQ9BWF2 469 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 ANKZF1Q9H8Y5 726 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 ARFGAP3Q9NP61 516 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 UBN1Q9NPG3 1134 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 FAM105AQ9NUU6 356 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 IP6K2Q9UHH9 426 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 GIT1Q9Y2X7 761 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 HES2Q9Y543 173 aa12.32□□□□□ -0.44
PAX6-266ENST00000640242 A0A0U1RQG5 324 aaPredicted RBP12.31□□□□□ -0.44
PAX6-266ENST00000640242 TMEM110-MUSTN1A8MSY1 372 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 KBTBD13C9JR72 458 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 PIRO00625 290 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 DDX3YO15523 660 aaKnown RBP12.31□□□□□ -0.44
PAX6-266ENST00000640242 CALCAP01258 141 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 TFRCP02786 760 aaKnown RBP12.31□□□□□ -0.44
PAX6-266ENST00000640242 CTSHP09668 335 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 PAX3P23760 479 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 YY1P25490 414 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 LRPAP1P30533 357 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 CTNNA1P35221 906 aaKnown RBP12.31□□□□□ -0.44
PAX6-266ENST00000640242 RAP1GAPP47736 663 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 NDST1P52848 882 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 CDH8P55286 799 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 GSCP56915 257 aaPredicted RBP12.31□□□□□ -0.44
PAX6-266ENST00000640242 RWDD2BP57060 319 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 DNAJC24Q6P3W2 148 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 MMS22LQ6ZRQ5 1243 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 DPH6Q7L8W6 267 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 ZNF784Q8NCA9 323 aaPredicted RBP12.31□□□□□ -0.44
PAX6-266ENST00000640242 SMG8Q8ND04 991 aaKnown RBP12.31□□□□□ -0.44
PAX6-266ENST00000640242 FEZF2Q8TBJ5 459 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 MS4A14Q96JA4 679 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 BEGAINQ9BUH8 593 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 GOLPH3Q9H4A6 298 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 ERVK-5Q9HDB9 667 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 GDAP2Q9NXN4 497 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 TUBGCP4Q9UGJ1 667 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.31□□□□□ -0.44
PAX6-266ENST00000640242 SNX9Q9Y5X1 595 aa12.31□□□□□ -0.44
PAX6-266ENST00000640242 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 KRIT1O00522 736 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 ZNF623O75123 536 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 SETSIPP0DME0 302 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 CETN2P41208 172 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 CAP1Q01518 475 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 PTP4A2Q12974 167 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 MAMLD1Q13495 774 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 SCARA3Q6AZY7 606 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 DCUN1D2Q6PH85 259 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 MRPL10Q7Z7H8 261 aaKnown RBP12.3□□□□□ -0.44
PAX6-266ENST00000640242 TOP6BLQ8N6T0 577 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 C1orf131Q8NDD1 294 aaKnown RBP12.3□□□□□ -0.44
PAX6-266ENST00000640242 APPL2Q8NEU8 664 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 CCDC26Q8TAB7 109 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 IPO4Q8TEX9 1081 aaKnown RBP12.3□□□□□ -0.44
PAX6-266ENST00000640242 WHAMMQ8TF30 809 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 ZNF296Q8WUU4 475 aaPredicted RBP12.3□□□□□ -0.44
PAX6-266ENST00000640242 MAIP1Q8WWC4 291 aa12.3□□□□□ -0.44
PAX6-266ENST00000640242 TFAP2BQ92481 460 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms