RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 IRF1P10914 325 aa11.54□□□□□ -0.56
SCN1B-208ENST00000640135 MBL2P11226 248 aaPredicted RBP11.54□□□□□ -0.56
SCN1B-208ENST00000640135 PDK2Q15119 407 aa11.54□□□□□ -0.56
SCN1B-208ENST00000640135 PWP2Q15269 919 aaKnown RBP11.54□□□□□ -0.56
SCN1B-208ENST00000640135 LY6KQ17RY6 165 aa11.54□□□□□ -0.56
SCN1B-208ENST00000640135 TIGD7Q6NT04 549 aaPredicted RBP11.54□□□□□ -0.56
SCN1B-208ENST00000640135 RASGRP2Q7LDG7 609 aa11.54□□□□□ -0.56
SCN1B-208ENST00000640135 ABCB6Q9NP58 842 aa11.54□□□□□ -0.56
SCN1B-208ENST00000640135 GPRC5CQ9NQ84 441 aa11.54□□□□□ -0.56
SCN1B-208ENST00000640135 THG1LQ9NWX6 298 aaKnown RBP11.54□□□□□ -0.56
SCN1B-208ENST00000640135 GTSE1Q9NYZ3 720 aa11.54□□□□□ -0.56
SCN1B-208ENST00000640135 AIPL1Q9NZN9 384 aa11.54□□□□□ -0.56
SCN1B-208ENST00000640135 UXTQ9UBK9 157 aaPredicted RBP11.54□□□□□ -0.56
SCN1B-208ENST00000640135 PACSIN2Q9UNF0 486 aaPredicted RBP11.54□□□□□ -0.56
SCN1B-208ENST00000640135 PCDHB5Q9Y5E4 795 aa11.54□□□□□ -0.56
SCN1B-208ENST00000640135 EPHB2P29323 1055 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 TWF1Q12792 350 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 FIGNQ5HY92 759 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 GLRA4Q5JXX5 417 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 SLC30A10Q6XR72 485 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 UNC45BQ8IWX7 931 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 CCNYL1Q8N7R7 359 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 UBA3Q8TBC4 463 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 RPRD1AQ96P16 312 aaPredicted RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 MTMR12Q9C0I1 747 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 RAB6BQ9NRW1 208 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 NDE1Q9NXR1 346 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 UMODL1Q5DID0 1318 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 TMEM88BA6NKF7 163 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 ATP5HO75947 161 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 CYP24A1Q07973 514 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 PTK6Q13882 451 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 BYSLQ13895 437 aaKnown RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 MORF4L2Q15014 288 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 PTGISQ16647 500 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 ANKRD23Q86SG2 305 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 VSIG10LQ86VR7 867 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 CBWD2Q8IUF1 395 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 PDCD7Q8N8D1 485 aaKnown RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 PDZD8Q8NEN9 1154 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 MAML1Q92585 1016 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 CYFIP2Q96F07 1278 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 TEX12Q9BXU0 123 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 FTHL17Q9BXU8 183 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 PKP3Q9Y446 797 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 SALL3Q9BXA9 1300 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 SIGLEC1Q9BZZ2 1709 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 PPP1R3GB7ZBB8 358 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 IRF6O14896 467 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 TUFMP49411 452 aaKnown RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 MDM2Q00987 491 aaPredicted RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 CREMQ03060 361 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 TRMT10CQ7L0Y3 403 aaKnown RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 TMEM199Q8N511 208 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 DNAJB3Q8WWF6 145 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 CINPQ9BW66 212 aaPredicted RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 MYO5BQ9ULV0 1848 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 TBKBP1A7MCY6 615 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 ANP32DO95626 131 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 APRTP07741 180 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 ZNF286BP0CG31 522 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 SESN2P58004 480 aaPredicted RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 ILF2Q12905 390 aaKnown RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 NAA25Q14CX7 972 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 MAPRE2Q15555 327 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 PAN2Q504Q3 1202 aaKnown RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 FASTKD1Q53R41 847 aaKnown RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 NUGGCQ68CJ6 796 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 OVOS1Q6IE37 1185 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 OTOP1Q7RTM1 612 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 SPATA4Q8NEY3 305 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 KLHL29Q96CT2 875 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 GPR63Q9BZJ6 419 aa11.53□□□□□ -0.56
SCN1B-208ENST00000640135 STN1Q9H668 368 aaKnown RBP11.53□□□□□ -0.56
SCN1B-208ENST00000640135 WDR91A4D1P6 747 aa11.52□□□□□ -0.56
SCN1B-208ENST00000640135 M0QYT0 321 aa11.52□□□□□ -0.56
SCN1B-208ENST00000640135 PIK3CDO00329 1044 aa11.52□□□□□ -0.56
SCN1B-208ENST00000640135 FDFT1P37268 417 aa11.52□□□□□ -0.56
SCN1B-208ENST00000640135 ARHGDIAP52565 204 aa11.52□□□□□ -0.56
SCN1B-208ENST00000640135 PDAP1Q13442 181 aaKnown RBP11.52□□□□□ -0.56
SCN1B-208ENST00000640135 TRIM65Q6PJ69 517 aa11.52□□□□□ -0.56
SCN1B-208ENST00000640135 DEFB128Q7Z7B8 93 aa11.52□□□□□ -0.56
SCN1B-208ENST00000640135 CDR2LQ86X02 465 aaPredicted RBP11.52□□□□□ -0.56
SCN1B-208ENST00000640135 ZDHHC17Q8IUH5 632 aa11.52□□□□□ -0.56
SCN1B-208ENST00000640135 GPATCH11Q8N954 259 aa11.52□□□□□ -0.56
SCN1B-208ENST00000640135 RIN2Q8WYP3 895 aaPredicted RBP11.52□□□□□ -0.56
SCN1B-208ENST00000640135 XAB2Q9HCS7 855 aaKnown RBP11.52□□□□□ -0.56
SCN1B-208ENST00000640135 TPX2Q9ULW0 747 aaKnown RBP11.52□□□□□ -0.56
SCN1B-208ENST00000640135 CAPN7Q9Y6W3 813 aa11.52□□□□□ -0.56
SCN1B-208ENST00000640135 PSTPIP1O43586 416 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 RBP3P10745 1247 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 PYGBP11216 843 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 GEMP55040 296 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 BST2Q10589 180 aaKnown RBP11.52□□□□□ -0.57
SCN1B-208ENST00000640135 WASHC5Q12768 1159 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 PKN1Q16512 942 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 CCNJLQ8IV13 435 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 ENGASEQ8NFI3 743 aa11.52□□□□□ -0.57
SCN1B-208ENST00000640135 SPATA18Q8TC71 538 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms