RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 SLC26A3P40879 764 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 NAB1Q13506 487 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MAPK6Q16659 721 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 LACTB2Q53H82 288 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MAMDC2Q7Z304 686 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MB21D2Q8IYB1 491 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ANKFN1Q8N957 763 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 C3orf58Q8NDZ4 430 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 NSUN6Q8TEA1 469 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 WASF1Q92558 559 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MAGED4Q96JG8 741 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 NUP58Q9BVL2 599 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CINPQ9BW66 212 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TUT1Q9H6E5 874 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 DNAJC5BQ9UF47 199 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 AP3M1Q9Y2T2 418 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TAF1LQ8IZX4 1826 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ACEP12821 1306 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 GPR89AB7ZAQ6 455 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 DNALI1O14645 258 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 FAM107AO95990 144 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 GPR89BP0CG08 455 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 GPD2P43304 727 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MMEL1Q495T6 779 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ANKRD20A8PQ5CZ79 823 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 RFPL4BQ6ZWI9 263 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 R3HCC1LQ7Z5L2 792 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 AGAP11Q8TF27 550 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 USP13Q92995 863 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 QKIQ96PU8 341 aaKnown RBP eCLIP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 SLC6A17Q9H1V8 727 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 KCNF1Q9H3M0 494 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CAB39LQ9H9S4 337 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 STOML1Q9UBI4 398 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TAF4O00268 1085 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 KRT37O76014 449 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 STARD3NLO95772 234 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CHRNA1P02708 482 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 GLAP06280 429 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 KRT19P08727 400 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 FDPSP14324 419 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 SP100P23497 879 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CDC25BP30305 580 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 UBE2IP63279 158 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 GUCY1A3Q02108 690 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ANKRD20A4Q4UJ75 823 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 SNRNP48Q6IEG0 339 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PRR23BQ6ZRT6 265 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 VASH1Q7L8A9 365 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TRIM69Q86WT6 500 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CLEC4FQ8N1N0 589 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ARHGAP24Q8N264 748 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MINDY2Q8NBR6 621 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 OR10Z1Q8NGY1 313 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 OR6S1Q8NH40 331 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 HUS1BQ8NHY5 278 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TGFBRAP1Q8WUH2 860 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PDCD6IPQ8WUM4 868 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CDCA7LQ96GN5 454 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PHACTR3Q96KR7 559 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 INTS7Q9NVH2 962 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 AFF4Q9UHB7 1163 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ARHGAP26Q9UNA1 814 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 HEY1Q9Y5J3 304 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TLL2Q9Y6L7 1015 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CCDC78A2IDD5 438 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MAGEA13PA6NCF6 341 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 SNPHO15079 494 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 SERPINB7O75635 380 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 DGAT1O75907 488 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 RHOBTB1O94844 696 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CYP1A1P04798 512 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 GSTA1P08263 222 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PABPC4LP0CB38 370 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 HLA-DPA1P20036 260 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ITGALP20701 1170 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ATXN3P54252 364 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TMEM63BQ5T3F8 832 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 LIN54Q6MZP7 749 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 SLC30A6Q6NXT4 461 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 KRT73Q86Y46 540 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 LPCAT1Q8NF37 534 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 IL17RDQ8NFM7 739 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 SCFD1Q8WVM8 642 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 RAPGEF4Q8WZA2 1011 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MYDGFQ969H8 173 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PPM1MQ96MI6 270 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 BPIFA3Q9BQP9 254 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 NAPBQ9H115 298 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 KAT14Q9H8E8 782 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 COG5Q9UP83 839 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MAD1L1Q9Y6D9 718 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 FAM47DPA6NHR8 397 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MYL4P12829 197 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ANXA8P13928 327 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ANPEPP15144 967 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 MX1P20591 662 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 BCAMP50895 628 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CCDC6Q16204 474 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms