RNA–Protein interactions for RNA: ENST00000639064.1

HNRNPU-218, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-218ENST00000639064 TATDN2Q93075 761 aa9.8□□□□□ -0.84
HNRNPU-218ENST00000639064 C18orf25Q96B23 403 aaPredicted RBP9.8□□□□□ -0.84
HNRNPU-218ENST00000639064 CYFIP2Q96F07 1278 aa9.8□□□□□ -0.84
HNRNPU-218ENST00000639064 PLEKHA5Q9HAU0 1116 aa9.8□□□□□ -0.84
HNRNPU-218ENST00000639064 UBE2TQ9NPD8 197 aaPredicted RBP9.8□□□□□ -0.84
HNRNPU-218ENST00000639064 PPANQ9NQ55 473 aaKnown RBP9.8□□□□□ -0.84
HNRNPU-218ENST00000639064 CNTN3Q9P232 1028 aa9.8□□□□□ -0.84
HNRNPU-218ENST00000639064 TUBGCP4Q9UGJ1 667 aa9.8□□□□□ -0.84
HNRNPU-218ENST00000639064 SIX4Q9UIU6 781 aa9.8□□□□□ -0.84
HNRNPU-218ENST00000639064 DNAJC12Q9UKB3 198 aa9.8□□□□□ -0.84
HNRNPU-218ENST00000639064 SMIM28A0A1B0GU29 152 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 TRIM43BA6NCK2 446 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 CLSTN1O94985 981 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 TNNC2P02585 160 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 ITGB3P05106 788 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 HSPA9P38646 679 aaKnown RBP9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 ARHGAP44Q17R89 818 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 SPRED3Q2MJR0 410 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 KLHL7Q8IXQ5 586 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 PPM1KQ8N3J5 372 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 RNF10Q8N5U6 811 aaKnown RBP9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 OR2W6PQ8NHA6 318 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 CXorf38Q8TB03 319 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 WHAMMQ8TF30 809 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 TRIM43Q96BQ3 446 aaPredicted RBP9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 GAD1Q99259 594 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 TRAIPQ9BWF2 469 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 GOLGA2P5Q9HBQ8 144 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 APOBEC3GQ9HC16 384 aaKnown RBP9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 TMBIM4Q9HC24 238 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 SLC40A1Q9NP59 571 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 RGS18Q9NS28 235 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 KLC4Q9NSK0 619 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 C2CD2Q9Y426 696 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 SSU72P8A0A1W2PR75 194 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 PTGESO14684 152 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 ZNF623O75123 536 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 RASSF9O75901 435 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 AP3M2P53677 418 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 KCTD19Q17RG1 926 aaPredicted RBP9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 C6orf89Q6UWU4 347 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 MRPL10Q7Z7H8 261 aaKnown RBP9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 ECHDC2Q86YB7 292 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 GSTCDQ8NEC7 633 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 HELQQ8TDG4 1101 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 GPR88Q9GZN0 384 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 MIOSQ9NXC5 875 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 RNF14Q9UBS8 474 aa9.79□□□□□ -0.84
HNRNPU-218ENST00000639064 TANC1Q9C0D5 1861 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 GRID2IPA4D2P6 1211 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 C9IYK1 514 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 PPEF2O14830 753 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 CHUKO15111 745 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 ARID5AQ03989 594 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 SOX4Q06945 474 aaPredicted RBP9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 TRPC3Q13507 836 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 ZBTB6Q15916 424 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 UAP1Q16222 522 aaPredicted RBP9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 XKR4Q5GH76 650 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 VWCEQ96DN2 955 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 KREMEN1Q96MU8 473 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 NT5C1BQ96P26 610 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 SPAG5Q96R06 1193 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 PACSIN1Q9BY11 444 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 DPP3Q9NY33 737 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 CACNG4Q9UBN1 327 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 NUB1Q9Y5A7 615 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 ARL5CA6NH57 179 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 CCDC172P0C7W6 258 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 ECHS1P30084 290 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 POLR2BP30876 1174 aaKnown RBP9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 HSD17B3P37058 310 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 RAB27AP51159 221 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 JAM2P57087 298 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 NOP14P78316 857 aaKnown RBP9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 HLTFQ14527 1009 aaKnown RBP eCLIP9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 DRAP1Q14919 205 aaPredicted RBP9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 NAB2Q15742 525 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 QPCTQ16769 361 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 WDR44Q5JSH3 913 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 MEI1Q5TIA1 1274 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 SLC24A5Q71RS6 500 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 ZNF598Q86UK7 904 aaKnown RBP9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 C1orf131Q8NDD1 294 aaKnown RBP9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 SEPT8Q92599 483 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 EDEM3Q9BZQ6 932 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 XYLT2Q9H1B5 865 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 TSPYL2Q9H2G4 693 aaPredicted RBP9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 MCM8Q9UJA3 840 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 FBXL5Q9UKA1 691 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 AGAP1Q9UPQ3 857 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 RALGAPA2Q2PPJ7 1873 aa9.78□□□□□ -0.84
HNRNPU-218ENST00000639064 F8VZ95 297 aa9.77□□□□□ -0.85
HNRNPU-218ENST00000639064 ENPP3O14638 875 aa9.77□□□□□ -0.85
HNRNPU-218ENST00000639064 ASS1P00966 412 aaKnown RBP9.77□□□□□ -0.85
HNRNPU-218ENST00000639064 CXCL10P02778 98 aa9.77□□□□□ -0.85
HNRNPU-218ENST00000639064 KCNE1P15382 129 aa9.77□□□□□ -0.85
HNRNPU-218ENST00000639064 RDXP35241 583 aaKnown RBP9.77□□□□□ -0.85
HNRNPU-218ENST00000639064 SCNN1GP51170 649 aa9.77□□□□□ -0.85
HNRNPU-218ENST00000639064 TNNC1P63316 161 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms