RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 PIM1P11309 404 aaPredicted RBP3.52□□□□□ -1.85
GYPB-216ENST00000638448 IDEP14735 1019 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 HDCP19113 662 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 CASRP41180 1078 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 GDF5P43026 501 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 SLC11A2P49281 568 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 CARSP49589 748 aaKnown RBP3.52□□□□□ -1.85
GYPB-216ENST00000638448 CLRN1P58418 232 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 ATP2C1P98194 919 aaPredicted RBP3.52□□□□□ -1.85
GYPB-216ENST00000638448 CNGB1Q14028 1251 aaPredicted RBP3.52□□□□□ -1.85
GYPB-216ENST00000638448 SPARCL1Q14515 664 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 PFKFB4Q16877 469 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 BMT2Q1RMZ1 405 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 C3orf38Q5JPI3 329 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 MFSD5Q6N075 450 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 CLEC4GQ6UXB4 293 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 RNF44Q7L0R7 432 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 SKAP1Q86WV1 359 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 GAS2L3Q86XJ1 694 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 ZFPM1Q8IX07 1006 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 YAF2Q8IY57 180 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 COLGALT2Q8IYK4 626 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 CELF5Q8N6W0 485 aaKnown RBP3.52□□□□□ -1.85
GYPB-216ENST00000638448 OR5M3Q8NGP4 307 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 FAM71BQ8TC56 605 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 RSC1A1Q92681 617 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 SPSB4Q96A44 273 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 CEP95Q96GE4 821 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 MOGAT1Q96PD6 335 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 SORCS2Q96PQ0 1159 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 SPATA5L1Q9BVQ7 753 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 MAGEB5Q9BZ81 275 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 MAGEH1Q9H213 219 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 NELFAQ9H3P2 528 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 FAM83DQ9H4H8 585 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 SLC39A10Q9ULF5 831 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 PCDHGB3Q9Y5G1 929 aa3.52□□□□□ -1.85
GYPB-216ENST00000638448 TBKBP1A7MCY6 615 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 PRRT4C9JH25 899 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 ACKR2O00590 384 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 NCAM2O15394 837 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 HOXA3O43365 443 aaPredicted RBP3.51□□□□□ -1.85
GYPB-216ENST00000638448 SUV39H1O43463 412 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 GLP2RO95838 553 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 GRPP07492 148 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 SRGNP10124 158 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 EGR1P18146 543 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 MGAT1P26572 445 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 IL1R2P27930 398 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 GABRB3P28472 473 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 SLC5A2P31639 672 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 SLC6A4P31645 630 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 MAN1A1P33908 653 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 ACVRL1P37023 503 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 CASP2P42575 452 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 RRADP55042 308 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 NOMO3P69849 1222 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 DUSP8Q13202 625 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 TBX2Q13207 712 aaPredicted RBP3.51□□□□□ -1.85
GYPB-216ENST00000638448 CTBP1Q13363 440 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 PRKG1Q13976 671 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 TBR1Q16650 682 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 TRIM71Q2Q1W2 868 aaKnown RBP3.51□□□□□ -1.85
GYPB-216ENST00000638448 AMOTQ4VCS5 1084 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 INTS11Q5TA45 600 aaKnown RBP3.51□□□□□ -1.85
GYPB-216ENST00000638448 KLHDC7AQ5VTJ3 777 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 LVRNQ6Q4G3 990 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 UNC13DQ70J99 1090 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 GPRIN1Q7Z2K8 1008 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 TXLNBQ8N3L3 684 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 GALNT15Q8N3T1 639 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 NAXEQ8NCW5 288 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 ZFP28Q8NHY6 868 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 SPPL3Q8TCT6 385 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 USP13Q92995 863 aaPredicted RBP3.51□□□□□ -1.85
GYPB-216ENST00000638448 NEIL1Q96FI4 390 aaPredicted RBP3.51□□□□□ -1.85
GYPB-216ENST00000638448 SNX27Q96L92 541 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 PPM1MQ96MI6 270 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 CNPPD1Q9BV87 410 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 TINAGL1Q9GZM7 467 aaPredicted RBP3.51□□□□□ -1.85
GYPB-216ENST00000638448 CHST8Q9H2A9 424 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 TERF2IPQ9NYB0 399 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 DACT1Q9NYF0 836 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 ZNF212Q9UDV6 495 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 ZFR2Q9UPR6 939 aaKnown RBP3.51□□□□□ -1.85
GYPB-216ENST00000638448 RUVBL1Q9Y265 456 aaKnown RBP3.51□□□□□ -1.85
GYPB-216ENST00000638448 MAN2B2Q9Y2E5 1009 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 TMEM98Q9Y2Y6 226 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 NR2E1Q9Y466 385 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.51□□□□□ -1.856e-10■■■■■ 33.8
GYPB-216ENST00000638448 ZMYM3Q14202 1370 aa3.51□□□□□ -1.85
GYPB-216ENST00000638448 LOC102723971A0A1B0GUV8 181 aa3.5□□□□□ -1.85
GYPB-216ENST00000638448 MYO1CO00159 1063 aa3.5□□□□□ -1.85
GYPB-216ENST00000638448 MATN2O00339 956 aa3.5□□□□□ -1.85
GYPB-216ENST00000638448 PODXLO00592 558 aa3.5□□□□□ -1.85
GYPB-216ENST00000638448 CYR61O00622 381 aa3.5□□□□□ -1.85
GYPB-216ENST00000638448 FZD7O75084 574 aa3.5□□□□□ -1.85
GYPB-216ENST00000638448 UNC5CO95185 931 aa3.5□□□□□ -1.85
GYPB-216ENST00000638448 POMCP01189 267 aa3.5□□□□□ -1.85
GYPB-216ENST00000638448 SBK3P0C264 359 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms