RNA–Protein interactions for RNA: ENST00000637966.1

CACNA1A-255, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,887 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-255ENST00000637966 PAAF1Q9BRP4 392 aa13.12□□□□□ -0.31
CACNA1A-255ENST00000637966 LRFN2Q9ULH4 789 aa13.12□□□□□ -0.31
CACNA1A-255ENST00000637966 SNX12Q9UMY4 172 aa13.12□□□□□ -0.31
CACNA1A-255ENST00000637966 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
CACNA1A-255ENST00000637966 L1RE1Q9UN81 338 aa13.12□□□□□ -0.31
CACNA1A-255ENST00000637966 JRKLQ9Y4A0 524 aa13.12□□□□□ -0.31
CACNA1A-255ENST00000637966 TTC3P53804 2025 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 A0A0A6YYK5 440 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 FAM170AA1A519 330 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 TRIM43BA6NCK2 446 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 PDE2AO00408 941 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 BUB1O43683 1085 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 VDRP11473 427 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 ABCB4P21439 1286 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 ITGB8P26012 769 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 GNL1P36915 607 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 CLCN6P51797 869 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 IKBKEQ14164 716 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 CNKSR3Q6P9H4 555 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 ZNF280BQ86YH2 543 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 NOA1Q8NC60 698 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 C3orf58Q8NDZ4 430 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 OR6B3Q8NGW1 331 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 KBTBD7Q8WVZ9 684 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 CPA5Q8WXQ8 436 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 TRIM43Q96BQ3 446 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 VWCEQ96DN2 955 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 NOX5Q96PH1 765 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 THAP2Q9H0W7 228 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 ANKZF1Q9H8Y5 726 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 NME7Q9Y5B8 376 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 PCDHGC5Q9Y5F6 944 aa13.11□□□□□ -0.31
CACNA1A-255ENST00000637966 ZNF185O15231 689 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 DDHD2O94830 711 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 PAX3P23760 479 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 NAP1L1P55209 391 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 GPC5P78333 572 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 CENPCQ03188 943 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 DSC1Q08554 894 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 CNGA2Q16280 664 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 SGO2Q562F6 1265 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 NAA35Q5VZE5 725 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 DCLRE1AQ6PJP8 1040 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 UBE2Q1Q7Z7E8 422 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 PASD1Q8IV76 773 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 TLR10Q9BXR5 811 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 SNX25Q9H3E2 840 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 TBC1D13Q9NVG8 400 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 CTAGE15A4D2H0 777 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 GRID2IPA4D2P6 1211 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 A8MXQ7 604 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 HOXA2O43364 376 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 NCK2O43639 380 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 B3GAT3O94766 335 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 LSM8O95777 96 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 CTAGE8P0CG41 777 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 RAG1P15918 1043 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 WARSP23381 471 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 LMO2P25791 158 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 NOP2P46087 812 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 NSFP46459 744 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 AARSP49588 968 aaKnown RBP eCLIP13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 NOMO3P69849 1222 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 RNASELQ05823 741 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 TIGD5Q53EQ6 642 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 WSCD1Q658N2 575 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 CD300LGQ6UXG3 332 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 DSTYKQ6XUX3 929 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 ACOT1Q86TX2 421 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 CTAGE6Q86UF2 777 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 CTAGE4Q8IX94 777 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 ADGRF2Q8IZF7 708 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 MCOLN2Q8IZK6 566 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 ABI1Q8IZP0 508 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 CRYBG2Q8N1P7 616 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 WDTC1Q8N5D0 677 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 TMEM35BQ8NCS4 154 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 MSANTD4Q8NCY6 345 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 SLC35G2Q8TBE7 412 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 ARHGEF26Q96DR7 871 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 CASD1Q96PB1 797 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 ALS2CR12Q96Q35 445 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 STXBP5LQ9Y2K9 1186 aa13.1□□□□□ -0.31
CACNA1A-255ENST00000637966 NCANO14594 1321 aa13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 PDGFRBP09619 1106 aa13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 PRLRP16471 622 aa13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 CDH5P33151 784 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 IFI16Q16666 785 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 PPP1R2P3Q6NXS1 205 aa13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 DENND1BQ6P3S1 775 aa13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 PHF13Q86YI8 300 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 CREG2Q8IUH2 290 aa13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 NPAS4Q8IUM7 802 aa13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 COLGALT2Q8IYK4 626 aa13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 TMEM86AQ8N2M4 240 aa13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 COG1Q8WTW3 980 aa13.09□□□□□ -0.31
CACNA1A-255ENST00000637966 RFFLQ8WZ73 363 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms