RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ISLR2Q6UXK2 745 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 NARS2Q96I59 477 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 CAAP1Q9H8G2 361 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 ELL3Q9HB65 397 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 INTS13Q9NVM9 706 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 FBXO40Q9UH90 709 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 NARFQ9UHQ1 456 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 NAGPAQ9UK23 515 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 KRT76Q01546 638 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 EPS8Q12929 822 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 NT5DC4Q86YG4 428 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 CCDC151A5D8V7 595 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 ZC3H11AO75152 810 aaKnown RBP eCLIP17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 PRIM2P49643 509 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 ZNF438Q7Z4V0 828 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 FAM129AQ9BZQ8 928 aa17.72■□□□□ 0.43
CACNA1A-253ENST00000637927 RPS6KA5O75582 802 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 MYL4P12829 197 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 WDR72Q3MJ13 1102 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 PI4K2AQ9BTU6 479 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 USP27XA6NNY8 438 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 KRT38O76015 456 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 UMPSP11172 480 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 THPOP40225 353 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 GRM4Q14833 912 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 IZUMO3Q5VZ72 239 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 OSBPL9Q96SU4 736 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 OSBPL6Q9BZF3 934 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 CRLS1Q9UJA2 301 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 PCDHB8Q9UN66 801 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 PODXLO00592 558 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 ZNF512BQ96KM6 892 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 XPO7Q9UIA9 1087 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 ATP7BP35670 1465 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 FAM25AB3EWG3 89 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 FAM25CB3EWG5 89 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 FAM25GB3EWG6 89 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 EEF2KO00418 725 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 SCGNO76038 276 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 CHGBP05060 677 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 KRT20P35900 424 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 STAT5BP51692 787 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 LONRF1Q17RB8 773 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 FAXCQ5TGI0 409 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 SYTL1Q8IYJ3 562 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 THAP11Q96EK4 314 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 SH3GL1Q99961 368 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 PARVAQ9NVD7 372 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 WWOXQ9NZC7 414 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 LRCH1Q9Y2L9 728 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 KRT75O95678 551 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 CSF1RP07333 972 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 BARHL2Q9NY43 387 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 TSC22D4Q9Y3Q8 395 aa17.71■□□□□ 0.43
CACNA1A-253ENST00000637927 TBXAS1P24557 533 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 BAATQ14032 418 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 SAPCD2Q86UD0 394 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 NT5DC3Q86UY8 548 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 TRPC4APQ8TEL6 797 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 KIFC1Q9BW19 673 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 CYP4F12Q9HCS2 524 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 FHOD1Q9Y613 1164 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 PRR36Q9H6K5 1346 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 CCDC85CA6NKD9 419 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 AP3B1O00203 1094 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 PMPCBO75439 489 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 MAPK10P53779 464 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 TYW3Q6IPR3 259 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 SEMA4DQ92854 862 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 A0A087WUV0 522 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 NPTXRO95502 500 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 DUOXA2Q1HG44 320 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 RDM1Q8NG50 284 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 KCTD10Q9H3F6 313 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 EHD2Q9NZN4 543 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 H7C1W4 665 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 ASS1P00966 412 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 WEE2P0C1S8 567 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 NCAM1P13591 858 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 ARL6IP4Q66PJ3 421 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 FBXO38Q6PIJ6 1188 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 CLYBLQ8N0X4 340 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 C4orf33Q8N1A6 199 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 ATP6V1B1P15313 513 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 RCN1Q15293 331 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 DHX40Q8IX18 779 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 SHOC2Q9UQ13 582 aa17.7■□□□□ 0.42
CACNA1A-253ENST00000637927 SYNCRIPO60506 623 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 MBL2P11226 248 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 EPC2Q52LR7 807 aa17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 SETD3Q86TU7 594 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 SNF8Q96H20 258 aa17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 PSD3Q9NYI0 1048 aa17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 LIMA1Q9UHB6 759 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 LGALS16A8MUM7 142 aa17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 KIF1CO43896 1103 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 IGKV5-2P06315 115 aa17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 NOS3P29474 1203 aa17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 TIPRLO75663 272 aa17.69■□□□□ 0.42
CACNA1A-253ENST00000637927 HARS2P49590 506 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms