RNA–Protein interactions for RNA: ENST00000637511.1

NRXN1-259, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-259	ENST00000637511	IGSF9B	Q9UPX0	1349 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	SSU72P8	A0A1W2PR75	194 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	TMEM247	A6NEH6	219 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	CCDC169	A6NNP5	214 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	CBX6	O95503	412 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	COPB2	P35606	906 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	BYSL	Q13895	437 aa	Known RBP	13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	ZFAND2B	Q8WV99	257 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	USP6NL	Q92738	828 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	CELF4	Q9BZC1	486 aa	Known RBP	13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	SPATC1L	Q9H0A9	340 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	SLC9A2	Q9UBY0	812 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511		A0A0G2JLL6	359 aa	Predicted RBP	13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	RARA	P10276	462 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	UBA1	P22314	1058 aa	Known RBP	13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	KRT76	Q01546	638 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	NFIL3	Q16649	462 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	SLC9C1	Q4G0N8	1177 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	ZBTB41	Q5SVQ8	909 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	RNF169	Q8NCN4	708 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	NEK9	Q8TD19	979 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	LENG1	Q96BZ8	264 aa	Predicted RBP	13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	DCPS	Q96C86	337 aa	Known RBP	13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	ARMC7	Q9H6L4	198 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511	AMACR	Q9UHK6	382 aa		13.78	□□□□□ -0.2
NRXN1-259	ENST00000637511		F8VZ95	297 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	PJA2	O43164	708 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	ITGA2B	P08514	1039 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	CYP2C8	P10632	490 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	RPL13	P26373	211 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	RTP1	P59025	263 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	MKRN3	Q13064	507 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	ZNF268	Q14587	947 aa	Predicted RBP	13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	FOXB2	Q5VYV0	432 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	KCTD17	Q8N5Z5	321 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	SYT11	Q9BT88	431 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	SELENON	Q9NZV5	590 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	LARS	Q9P2J5	1176 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	TBX20	Q9UMR3	447 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	PPP2R3B	Q9Y5P8	575 aa		13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	ATXN2	Q99700	1313 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-259	ENST00000637511	DENND3	A2RUS2	1198 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	FOXN3	O00409	490 aa	Predicted RBP	13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	TCP1	P17987	556 aa	Known RBP	13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	NAA20	P61599	178 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	ATP1A4	Q13733	1029 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	CLUL1	Q15846	466 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	MTERF2	Q49AM1	385 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	ST13P4	Q8IZP2	240 aa	Predicted RBP	13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	STK32A	Q8WU08	396 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	SYN2	Q92777	582 aa	Predicted RBP	13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	SENP7	Q9BQF6	1050 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	EDEM3	Q9BZQ6	932 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	FRMD4B	Q9Y2L6	1034 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	USP15	Q9Y4E8	981 aa	Predicted RBP	13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	GSTTP1	A0A1W2PQM5	241 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	PALM	O75781	387 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	CPA2	P48052	419 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	DRAP1	Q14919	205 aa	Predicted RBP	13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	ARHGAP44	Q17R89	818 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	HSDL1	Q3SXM5	330 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	GJC2	Q5T442	439 aa	Predicted RBP	13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	GPAT2	Q6NUI2	795 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	SLC20A1	Q8WUM9	679 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	COPS5	Q92905	334 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	ZBTB45	Q96K62	511 aa	Predicted RBP	13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	LRRC4C	Q9HCJ2	640 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	NAGPA	Q9UK23	515 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	TMCO1	Q9UM00	188 aa		13.77	□□□□□ -0.21
NRXN1-259	ENST00000637511	PTPRJ	Q12913	1337 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	KRT36	O76013	467 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	GSTT2	P0CG29	244 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	GSTT2B	P0CG30	244 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	JAK3	P52333	1124 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	FOXD4	Q12950	439 aa	Predicted RBP	13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	SEZ6	Q53EL9	994 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	SLC9A9	Q8IVB4	645 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	GLYCTK	Q8IVS8	523 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	ZNF668	Q96K58	619 aa	Predicted RBP	13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	TMEM117	Q9H0C3	514 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	INTS2	Q9H0H0	1204 aa	Known RBP	13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	PORCN	Q9H237	461 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	CYP26B1	Q9NR63	512 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	EURL	Q9NYK6	297 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	DNAJC12	Q9UKB3	198 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	GJB1	P08034	283 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	MAPT	P10636	758 aa	Known RBP	13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	ASIC2	Q16515	512 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	DENND2C	Q68D51	928 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	GRID2IP	A4D2P6	1211 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	LIN7A	O14910	233 aa	Predicted RBP	13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	FARP2	O94887	1054 aa	Predicted RBP	13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	GHR	P10912	638 aa		13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	HOXA7	P31268	230 aa	Predicted RBP	13.76	□□□□□ -0.21
NRXN1-259	ENST00000637511	PRKCI	P41743	596 aa		13.76	□□□□□ -0.21

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