RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SNRNP35Q16560 246 aaKnown RBP20.38■□□□□ 0.85
CLN6-221ENST00000637494 ZNF852Q6ZMS4 543 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 TPRG1Q6ZUI0 275 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 TMC8Q8IU68 726 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 CBWD2Q8IUF1 395 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 WDR49Q8IV35 697 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 PDCL2Q8N4E4 241 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 TTC9BQ8N6N2 239 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 TOP6BLQ8N6T0 577 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 ZSWIM3Q96MP5 696 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 ACBD6Q9BR61 282 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 OSBPL6Q9BZF3 934 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 FOXQ1Q9C009 403 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 TRPV4Q9HBA0 871 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 SLC39A2Q9NP94 309 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 AGPAT3Q9NRZ7 376 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 GDAP2Q9NXN4 497 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 DDX43Q9NXZ2 648 aaKnown RBP20.38■□□□□ 0.85
CLN6-221ENST00000637494 USP25Q9UHP3 1055 aa20.38■□□□□ 0.85
CLN6-221ENST00000637494 ZNF263O14978 683 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 GFRA3O60609 400 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 SOAT2O75908 522 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 HAPLN1P10915 354 aaPredicted RBP20.37■□□□□ 0.85
CLN6-221ENST00000637494 TNNI1P19237 187 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 GABRR2P28476 465 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 PCSK1P29120 753 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 GDI1P31150 447 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 NBL1P41271 181 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 MAGEA9P43362 315 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 CYP2J2P51589 502 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 CUL4BQ13620 913 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 LMBRD2Q68DH5 695 aaPredicted RBP20.37■□□□□ 0.85
CLN6-221ENST00000637494 MFSD6LQ8IWD5 586 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 XXYLT1Q8NBI6 393 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 RDH13Q8NBN7 331 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 GOLGA5Q8TBA6 731 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 HPDLQ96IR7 371 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 DDX23Q9BUQ8 820 aaKnown RBP20.37■□□□□ 0.85
CLN6-221ENST00000637494 LRRC3Q9BY71 257 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 EXOC1Q9NV70 894 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 SERTAD1Q9UHV2 236 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 L1RE1Q9UN81 338 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 WDFY4Q6ZS81 3184 aa20.37■□□□□ 0.85
CLN6-221ENST00000637494 FAM170BA6NMN3 283 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 PROB1E7EW31 1015 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 MAN2B1O00754 1011 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 CLIC2O15247 247 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 DLATP10515 647 aaKnown RBP20.36■□□□□ 0.85
CLN6-221ENST00000637494 CASP1P29466 404 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 HOXD13P35453 343 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 GPR158Q5T848 1215 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 VITQ6UXI7 678 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 DPH6Q7L8W6 267 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 ADGRF2Q8IZF7 708 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 CSGALNACT1Q8TDX6 532 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 SCFD1Q8WVM8 642 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 CCDC47Q96A33 483 aaKnown RBP20.36■□□□□ 0.85
CLN6-221ENST00000637494 LPIN3Q9BQK8 851 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 LTB4R2Q9NPC1 389 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 HEBP1Q9NRV9 189 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 ZMYM5Q9UJ78 669 aa20.36■□□□□ 0.85
CLN6-221ENST00000637494 HEPACAM2A8MVW5 462 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 TGFB1I1O43294 461 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 CMA1P23946 247 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 VIPR2P41587 438 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 RPL10AP62906 217 aaKnown RBP20.35■□□□□ 0.85
CLN6-221ENST00000637494 EHHADHQ08426 723 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 PSMD2Q13200 908 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 KNOP1Q1ED39 458 aaKnown RBP20.35■□□□□ 0.85
CLN6-221ENST00000637494 INTS6LQ5JSJ4 861 aaKnown RBP20.35■□□□□ 0.85
CLN6-221ENST00000637494 POTEHQ6S545 545 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 LRRTM3Q86VH5 581 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 C1orf210Q8IVY1 113 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 OR5B17Q8NGF7 314 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 GIPC2Q8TF65 315 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 LEO1Q8WVC0 666 aaPredicted RBP20.35■□□□□ 0.85
CLN6-221ENST00000637494 PI4K2AQ9BTU6 479 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 ZNF334Q9HCZ1 680 aaPredicted RBP20.35■□□□□ 0.85
CLN6-221ENST00000637494 TRPV5Q9NQA5 729 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 SIX4Q9UIU6 781 aa20.35■□□□□ 0.85
CLN6-221ENST00000637494 A0A1B0GVL5 298 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 EXOC3O60645 756 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 MYL1P05976 194 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 CSH1P0DML2 217 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 CSH2P0DML3 217 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 PFKFB1P16118 471 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 ATF6P18850 670 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 CDR1P51861 262 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 PSMD6Q15008 389 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 BMT2Q1RMZ1 405 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 GAREM2Q75VX8 874 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 FRMD5Q7Z6J6 570 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 SPATA2LQ8IUW3 424 aaPredicted RBP20.34■□□□□ 0.85
CLN6-221ENST00000637494 GRAMD1CQ8IYS0 662 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 NKD2Q969F2 451 aaPredicted RBP20.34■□□□□ 0.85
CLN6-221ENST00000637494 CCDC127Q96BQ5 260 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 PAGE5Q96GU1 130 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 MMS19Q96T76 1030 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 CGRRF1Q99675 332 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 SCAND2PQ9GZW5 306 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms