RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CXorf38Q8TB03 319 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 SPPL2BQ8TCT7 592 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 CGRRF1Q99675 332 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 GOLPH3LQ9H4A5 285 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 SLITRK6Q9H5Y7 841 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 SLC2A4RGQ9NR83 387 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 ABI2Q9NYB9 513 aaPredicted RBP14.83□□□□□ -0.04
PNKP-228ENST00000637325 PCDHB5Q9Y5E4 795 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 PTPRJQ12913 1337 aa14.83□□□□□ -0.04
PNKP-228ENST00000637325 NUP210Q8TEM1 1887 aaPredicted RBP14.82□□□□□ -0.04
PNKP-228ENST00000637325 CALUO43852 315 aaPredicted RBP14.82□□□□□ -0.04
PNKP-228ENST00000637325 PHACTR2O75167 634 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 ECI2O75521 394 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 CLSTN1O94985 981 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 PRR29P0C7W0 189 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 GJA1P17302 382 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 EPHA5P54756 1037 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 PTPN5P54829 565 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 PFKPQ01813 784 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 TRPC3Q13507 836 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 TEAD2Q15562 447 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 NFE2Q16621 373 aaPredicted RBP14.82□□□□□ -0.04
PNKP-228ENST00000637325 SCARA3Q6AZY7 606 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 TANGO2Q6ICL3 276 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 LRRTM3Q86VH5 581 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 SPATA18Q8TC71 538 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 PSMG2Q969U7 264 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 MMS19Q96T76 1030 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 LPIN3Q9BQK8 851 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 ACBD6Q9BR61 282 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 GPR88Q9GZN0 384 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 DNAJC25Q9H1X3 360 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 ZFP14Q9HCL3 533 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 F5P12259 2224 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 PTPRDP23468 1912 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 GREB1Q4ZG55 1949 aa14.82□□□□□ -0.04
PNKP-228ENST00000637325 OBSL1O75147 1896 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 A0A1W2PRU2 124 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 KRBA1A5PL33 1030 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 FGF19O95750 216 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 HAPLN1P10915 354 aaPredicted RBP14.81□□□□□ -0.04
PNKP-228ENST00000637325 NPR3P17342 541 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 ACAT1P24752 427 aaKnown RBP14.81□□□□□ -0.04
PNKP-228ENST00000637325 PCSK1P29120 753 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 NUBP1P53384 320 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 DPYDQ12882 1025 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 INTS6LQ5JSJ4 861 aaKnown RBP14.81□□□□□ -0.04
PNKP-228ENST00000637325 FAM78AQ5JUQ0 283 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 DPH6Q7L8W6 267 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 TMEM105Q8N8V8 129 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 PRSS33Q8NF86 280 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 SHKBP1Q8TBC3 707 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 GIPC2Q8TF65 315 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 ELSPBP1Q96BH3 223 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 SHDQ96IW2 340 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 GCNAQ96QF7 691 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 PI4K2AQ9BTU6 479 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 ATXN3LQ9H3M9 355 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 ARHGEF3Q9NR81 526 aa14.81□□□□□ -0.04
PNKP-228ENST00000637325 TICRRQ7Z2Z1 1910 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 CACNA1IQ9P0X4 2223 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 PDXKO00764 312 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 MOSPD3O75425 235 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 RHOBTB3O94955 611 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 CST3P01034 146 aaPredicted RBP14.8□□□□□ -0.04
PNKP-228ENST00000637325 NR3C1P04150 777 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 AOC1P19801 751 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 GABRR2P28476 465 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 TNNC1P63316 161 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 BIRC3Q13489 604 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 SOWAHAQ2M3V2 549 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 ARHGAP15Q53QZ3 475 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 CEP135Q66GS9 1140 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 CWF19L1Q69YN2 538 aaKnown RBP14.8□□□□□ -0.04
PNKP-228ENST00000637325 OSTM1Q86WC4 334 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 TMC8Q8IU68 726 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 SPATA2LQ8IUW3 424 aaPredicted RBP14.8□□□□□ -0.04
PNKP-228ENST00000637325 SLC9A9Q8IVB4 645 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 ZSCAN18Q8TBC5 510 aaPredicted RBP14.8□□□□□ -0.04
PNKP-228ENST00000637325 SMARCD2Q92925 531 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 ZSWIM3Q96MP5 696 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 ASB16Q96NS5 453 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 LRRC3Q9BY71 257 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 PLA2G2FQ9BZM2 168 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 IRF2BPLQ9H1B7 796 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 KCTD10Q9H3F6 313 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 TBC1D17Q9HA65 648 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 TMLHEQ9NVH6 421 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 FRMD4BQ9Y2L6 1034 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 ANAPC1Q9H1A4 1944 aa14.8□□□□□ -0.04
PNKP-228ENST00000637325 NRG2O14511 850 aaPredicted RBP14.79□□□□□ -0.04
PNKP-228ENST00000637325 GALR2O43603 387 aaPredicted RBP14.79□□□□□ -0.04
PNKP-228ENST00000637325 ATF6P18850 670 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 CASP4P49662 377 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 AP3M2P53677 418 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 NHLH1Q02575 133 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 SNW1Q13573 536 aaKnown RBP14.79□□□□□ -0.04
PNKP-228ENST00000637325 KCNB1Q14721 858 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 SLC44A4Q53GD3 710 aa14.79□□□□□ -0.04
PNKP-228ENST00000637325 POTEHQ6S545 545 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms