RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 LONRF1Q17RB8 773 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 LRIG3Q6UXM1 1119 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 NT5DC4Q86YG4 428 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 BRSK2Q8IWQ3 736 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 LMNTD2Q8IXW0 634 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 CD99L2Q8TCZ2 262 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 TAS1R2Q8TE23 839 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 PARD3BQ8TEW8 1205 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 CYFIP2Q96F07 1278 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 ZWILCHQ9H900 591 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 CPSF3Q9UKF6 684 aaKnown RBP8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 KIAA1257Q9ULG3 409 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 POLIQ9UNA4 740 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 PRG3Q9Y2Y8 225 aaPredicted RBP8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 COL1A2P08123 1366 aa8.1□□□□□ -1.11
CACNA1D-220ENST00000636999 ELNP15502 786 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 RAG1P15918 1043 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 ATICP31939 592 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 ALDH7A1P49419 539 aaKnown RBP8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 KCNMA1Q12791 1236 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 ECM1Q16610 540 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 MTHFD1LQ6UB35 978 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 SLAIN1Q8ND83 568 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 MYCBPAPQ8TBZ2 947 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 CPA5Q8WXQ8 436 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 SLC35C1Q96A29 364 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 BTBD6Q96KE9 485 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 RAB3IPQ96QF0 476 aaPredicted RBP8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 PRMT1Q99873 361 aaKnown RBP8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 KLHL11Q9NVR0 708 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 PI4K2BG5E9Z4 385 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 PHF2O75151 1096 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 CIB2O75838 187 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 FAM107AO95990 144 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 MMP3P08254 477 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 INHBAP08476 426 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 KRT3P12035 628 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 FSTL1Q12841 308 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 MAPRE1Q15691 268 aaKnown RBP8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 TSNAXIP1Q2TAA8 658 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 CCNYQ8ND76 341 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 DHX38Q92620 1227 aaKnown RBP8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 DDX27Q96GQ7 796 aaKnown RBP8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 TMEM169Q96HH4 297 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 C9orf72Q96LT7 481 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 POP1Q99575 1024 aaKnown RBP8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 TXNRD2Q9NNW7 524 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 AAASQ9NRG9 546 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 AIPL1Q9NZN9 384 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 KANSL3Q9P2N6 904 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 TAF1P21675 1872 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 ZNF263O14978 683 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 SEPT4O43236 478 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 AARSP49588 968 aaKnown RBP eCLIP8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 PTENP60484 403 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 CAPSQ13938 189 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 PSMD6Q15008 389 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 C2CD6Q53TS8 623 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 ARSHQ5FYA8 562 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 PPP6R3Q5H9R7 873 aaPredicted RBP8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 FOXR2Q6PJQ5 311 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 RASAL3Q86YV0 1011 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 SLC9A9Q8IVB4 645 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 BAP1Q92560 729 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 PPP2R3CQ969Q6 453 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 SEC16BQ96JE7 1060 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 XPO6Q96QU8 1125 aaKnown RBP8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 RNPEPQ9H4A4 650 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 CYP3A43Q9HB55 503 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 KLC4Q9NSK0 619 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 SNTG2Q9NY99 539 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 MORF4L1Q9UBU8 362 aa8.09□□□□□ -1.11
CACNA1D-220ENST00000636999 SOCS7O14512 581 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 ZBTB24O43167 697 aaPredicted RBP8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 TJP3O95049 919 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 GNRH1P01148 92 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 ODC1P11926 461 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 MSH2P43246 934 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 COBLL1Q53SF7 1204 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 KDM7AQ6ZMT4 941 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 C4orf50Q6ZRC1 276 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 RHOT1Q8IXI2 618 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 FBXO25Q8TCJ0 367 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 PYROXD1Q8WU10 500 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 ZBTB45Q96K62 511 aaPredicted RBP8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 NIFKQ9BYG3 293 aaKnown RBP8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 CARD9Q9H257 536 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 TMEM39AQ9NV64 488 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 SEPT10Q9P0V9 454 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 ITGA11Q9UKX5 1188 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 TNFSF13BQ9Y275 285 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 MAPK13O15264 365 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 PJA2O43164 708 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 ACADSBP45954 432 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 ITKQ08881 620 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 IZUMO3Q5VZ72 239 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 BTBD8Q5XKL5 378 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 TTC13Q8NBP0 860 aa8.08□□□□□ -1.12
CACNA1D-220ENST00000636999 SH3TC2Q8TF17 1288 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms