RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PARP9Q8IXQ6 854 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 RNF168Q8IYW5 571 aaPredicted RBP7.21□□□□□ -1.26
UPF3B-205ENST00000636792 TOP6BLQ8N6T0 577 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 COLGALT1Q8NBJ5 622 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 ZSWIM2Q8NEG5 633 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 OR5B17Q8NGF7 314 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 TMEM169Q96HH4 297 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 MRFAP1L1Q96HT8 127 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 SUSD3Q96L08 255 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 NT5C1BQ96P26 610 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 TGS1Q96RS0 853 aaKnown RBP7.21□□□□□ -1.26
UPF3B-205ENST00000636792 C11orf84Q9BUA3 381 aaPredicted RBP7.21□□□□□ -1.26
UPF3B-205ENST00000636792 NUP58Q9BVL2 599 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 EDEM3Q9BZQ6 932 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 NIF3L1Q9GZT8 377 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 LMAN2LQ9H0V9 348 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 NUCKS1Q9H1E3 243 aaKnown RBP7.21□□□□□ -1.26
UPF3B-205ENST00000636792 NRDE2Q9H7Z3 1164 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 CYP3A43Q9HB55 503 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.21□□□□□ -1.26
UPF3B-205ENST00000636792 KLK14Q9P0G3 267 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 GCNT4Q9P109 453 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 TUBGCP4Q9UGJ1 667 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 MYO6Q9UM54 1294 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 PLAGL2Q9UPG8 496 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 FAN1Q9Y2M0 1017 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 NUB1Q9Y5A7 615 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 PTPRJQ12913 1337 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 LINC01553A4QN01 128 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 GOLGA6L3A6NEY3 463 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 KPNA7A9QM74 516 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 NRP1O14786 923 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 LILRB3O75022 631 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 TACC1O75410 805 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 ZMYND10O75800 440 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 B3GAT3O94766 335 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 KIF4AO95239 1232 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 VNN1O95497 513 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 EFEMP2O95967 443 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 POMCP01189 267 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 HLA-DRAP01903 254 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 SOD2P04179 222 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 GALTP07902 379 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 LINC00271P0C7V0 271 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 CDC25BP30305 580 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 POLR2BP30876 1174 aaKnown RBP7.2□□□□□ -1.26
UPF3B-205ENST00000636792 BMPR1AP36894 532 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 OR1G1P47890 313 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 GCLMP48507 274 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 UBASH3AP57075 661 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 ERVK-21P61565 698 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 TNNC1P63316 161 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 SOX4Q06945 474 aaPredicted RBP7.2□□□□□ -1.26
UPF3B-205ENST00000636792 GAS6Q14393 721 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 MEA1Q16626 185 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 CBWD6Q4V339 395 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 CBWD3Q5JTY5 395 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 CBWD5Q5RIA9 395 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 SPOUT1Q5T280 376 aaKnown RBP7.2□□□□□ -1.26
UPF3B-205ENST00000636792 TRIM65Q6PJ69 517 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 LIMS2Q7Z4I7 341 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 DDX53Q86TM3 631 aaKnown RBP7.2□□□□□ -1.26
UPF3B-205ENST00000636792 UNC93AQ86WB7 457 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 SLC39A11Q8N1S5 342 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 APPL2Q8NEU8 664 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 EEF2KMTQ96G04 330 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 IGSF21Q96ID5 467 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 HPDLQ96IR7 371 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 HERC2P3Q9BVR0 1158 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 BCO2Q9BYV7 579 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 XYLT2Q9H1B5 865 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 ZNF395Q9H8N7 513 aaPredicted RBP7.2□□□□□ -1.26
UPF3B-205ENST00000636792 SLC28A3Q9HAS3 691 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 MIOSQ9NXC5 875 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 SPG21Q9NZD8 308 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 APEX2Q9UBZ4 518 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 PUF60Q9UHX1 559 aaKnown RBP7.2□□□□□ -1.26
UPF3B-205ENST00000636792 SIX4Q9UIU6 781 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 AGAP1Q9UPQ3 857 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.2□□□□□ -1.261e-6■■□□□ 13.3
UPF3B-205ENST00000636792 IRAK3Q9Y616 596 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 MRPL42Q9Y6G3 142 aaKnown RBP7.2□□□□□ -1.26
UPF3B-205ENST00000636792 PTPRDP23468 1912 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 ATG2AQ2TAZ0 1938 aa7.2□□□□□ -1.26
UPF3B-205ENST00000636792 MTCL1Q9Y4B5 1905 aaKnown RBP7.19□□□□□ -1.26
UPF3B-205ENST00000636792 A0A1W2PQJ5 194 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 GOLGA6L6A8MZA4 724 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 H7C4K7 107 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 PES1O00541 588 aaKnown RBP7.19□□□□□ -1.26
UPF3B-205ENST00000636792 HUS1O60921 280 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 DDHD2O94830 711 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 KRT19P08727 400 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 TPM1P09493 284 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 CCDC172P0C7W6 258 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 ATP1A3P13637 1013 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 PCSK1P29120 753 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 CTNNB1P35222 781 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 PBX1P40424 430 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 LHX1P48742 406 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 SLC11A1P49279 550 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms