RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PSMD2Q13200 908 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 PDGFRLQ15198 375 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 ANO7Q6IWH7 933 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 SLC23A3Q6PIS1 610 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 USP37Q86T82 979 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 SYT12Q8IV01 421 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 GLIS3Q8NEA6 775 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 CD101Q93033 1021 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 TDP1Q9NUW8 608 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 CACNA2D2Q9NY47 1150 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 KIAA1549LQ6ZVL6 1849 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 XBP1P17861 261 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 ATF6P18850 670 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 PROZP22891 400 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 AVPR1AP37288 418 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 NR5A1Q13285 461 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 SLC10A6Q3KNW5 377 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 CC2D1AQ6P1N0 951 aaPredicted RBP19.75■□□□□ 0.75
CLN6-212ENST00000636020 MAB21L3Q8N8X9 362 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 OLIG1Q8TAK6 271 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 HNRNPLLQ8WVV9 542 aaKnown RBP19.75■□□□□ 0.75
CLN6-212ENST00000636020 KIFAP3Q92845 792 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 TNFRSF25Q93038 417 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 TARS2Q9BW92 718 aaKnown RBP19.75■□□□□ 0.75
CLN6-212ENST00000636020 MRPL4Q9BYD3 311 aaKnown RBP19.75■□□□□ 0.75
CLN6-212ENST00000636020 CCDC86Q9H6F5 360 aaKnown RBP19.75■□□□□ 0.75
CLN6-212ENST00000636020 ECT2Q9H8V3 914 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 KIF9Q9HAQ2 790 aa19.75■□□□□ 0.75
CLN6-212ENST00000636020 MBD1Q9UIS9 605 aaPredicted RBP19.75■□□□□ 0.75
CLN6-212ENST00000636020 KALRNO60229 2985 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 WNT7AO00755 349 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 NEMFO60524 1076 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 LRPAP1P30533 357 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 TUFMP49411 452 aaKnown RBP19.74■□□□□ 0.75
CLN6-212ENST00000636020 BFSP1Q12934 665 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 STK3Q13188 491 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 VEPH1Q14D04 833 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 LPCAT2Q7L5N7 544 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 TAS1R3Q7RTX0 852 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 TMEM150AQ86TG1 271 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 HDDC3Q8N4P3 179 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 CPA6Q8N4T0 437 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 MDGA1Q8NFP4 955 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 USP33Q8TEY7 942 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 LARP6Q9BRS8 491 aaKnown RBP19.74■□□□□ 0.75
CLN6-212ENST00000636020 TCHPQ9BT92 498 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 TMEM134Q9H6X4 195 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 PTPRDP23468 1912 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 PHLPP2Q6ZVD8 1323 aa19.74■□□□□ 0.75
CLN6-212ENST00000636020 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.73■□□□□ 0.75
CLN6-212ENST00000636020 TYMPP19971 482 aa19.73■□□□□ 0.75
CLN6-212ENST00000636020 PTGER3P43115 390 aa19.73■□□□□ 0.75
CLN6-212ENST00000636020 OVOS1Q6IE37 1185 aa19.73■□□□□ 0.75
CLN6-212ENST00000636020 MPZL3Q6UWV2 235 aa19.73■□□□□ 0.75
CLN6-212ENST00000636020 TMEFF1Q8IYR6 380 aa19.73■□□□□ 0.75
CLN6-212ENST00000636020 CCDC26Q8TAB7 109 aa19.73■□□□□ 0.75
CLN6-212ENST00000636020 LRIG1Q96JA1 1093 aa19.73■□□□□ 0.75
CLN6-212ENST00000636020 FNBP1Q96RU3 617 aa19.73■□□□□ 0.75
CLN6-212ENST00000636020 SEPT5Q99719 369 aaPredicted RBP19.73■□□□□ 0.75
CLN6-212ENST00000636020 TNRC6BQ9UPQ9 1833 aaKnown RBP19.73■□□□□ 0.75
CLN6-212ENST00000636020 ZNF638Q14966 1978 aaKnown RBP19.73■□□□□ 0.75
CLN6-212ENST00000636020 URB1O60287 2271 aaKnown RBP19.73■□□□□ 0.75
CLN6-212ENST00000636020 F11P03951 625 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 P2RY2P41231 377 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 HNRNPDQ14103 355 aaKnown RBP19.72■□□□□ 0.75
CLN6-212ENST00000636020 MGAT5BQ3V5L5 792 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 ARMCX5Q6P1M9 558 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 DSTYKQ6XUX3 929 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 CCNI2Q6ZMN8 369 aaPredicted RBP19.72■□□□□ 0.75
CLN6-212ENST00000636020 RUFY3Q7L099 469 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 ARMCX6Q7L4S7 300 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 GIPC2Q8TF65 315 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 RLN3Q8WXF3 142 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 TMEM60Q9H2L4 133 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 SCUBE2Q9NQ36 999 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 FSCN3Q9NQT6 498 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 DENND4CQ5VZ89 1909 aa19.72■□□□□ 0.75
CLN6-212ENST00000636020 PLXNB3Q9ULL4 1909 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 HARSP12081 509 aaKnown RBP19.71■□□□□ 0.75
CLN6-212ENST00000636020 CD59P13987 128 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 DDX6P26196 483 aaKnown RBP eCLIP19.71■□□□□ 0.75
CLN6-212ENST00000636020 RPA1P27694 616 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 DPP6P42658 865 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 NPTX2P47972 431 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 ATXN3P54252 364 aaPredicted RBP19.71■□□□□ 0.75
CLN6-212ENST00000636020 NLRP12P59046 1061 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 ZNF268Q14587 947 aaPredicted RBP19.71■□□□□ 0.75
CLN6-212ENST00000636020 ZBTB6Q15916 424 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 TAF12Q16514 161 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 CRY1Q16526 586 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 SEZ6Q53EL9 994 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 PEAR1Q5VY43 1037 aaPredicted RBP19.71■□□□□ 0.75
CLN6-212ENST00000636020 ADAMTS14Q8WXS8 1223 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 ZBTB45Q96K62 511 aaPredicted RBP19.71■□□□□ 0.75
CLN6-212ENST00000636020 PILRBQ9UKJ0 227 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 MMP17Q9ULZ9 603 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 SLC6A14Q9UN76 642 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 RAXQ9Y2V3 346 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 STK36Q9NRP7 1315 aa19.71■□□□□ 0.75
CLN6-212ENST00000636020 ANTXRLA6NF34 631 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms