RNA–Protein interactions for RNA: ENST00000635978.1

CHRNA7-208, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 903 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-208ENST00000635978 CCDC170Q8IYT3 715 aa7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 FGF14Q92915 247 aa7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 SHDQ96IW2 340 aa7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 FAM167AQ96KS9 214 aa7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 CCDC43Q96MW1 224 aaKnown RBP7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 NIFKQ9BYG3 293 aaKnown RBP7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 FAM126AQ9BYI3 521 aaPredicted RBP7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 FGFBP2Q9BYJ0 223 aa7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 LTB4R2Q9NPC1 389 aa7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 ARMCX3Q9UH62 379 aaPredicted RBP7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 SAMM50Q9Y512 469 aa7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 DSPP15924 2871 aaKnown RBP7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 IGF2RP11717 2491 aa7.89□□□□□ -1.15
CHRNA7-208ENST00000635978 GCN1Q92616 2671 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 DMXL2Q8TDJ6 3036 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 ASH1LQ9NR48 2969 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 TTC26A0AVF1 554 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 FAM170BA6NMN3 283 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 DDX39AO00148 427 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 ZBTB39O15060 712 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 KIAA0391O15091 583 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 P4HA2O15460 535 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 TEX28O15482 410 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 GDF9O60383 454 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 C1RP00736 705 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 CCDC175P0C221 793 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 MYBP10242 640 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 EPB41P11171 864 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 DARSP14868 501 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 TRIM21P19474 475 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 TARSP26639 723 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 ANXA13P27216 316 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 KRT9P35527 623 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 PSMC2P35998 433 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 RFC5P40937 340 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 PHKA2P46019 1235 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 RPS9P46781 194 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 GPC3P51654 580 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 ADKP55263 362 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 NLRP11P59045 1033 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 GUCA2AQ02747 115 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 RAD51AP2Q09MP3 1159 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 DMP1Q13316 513 aaPredicted RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 SYCP1Q15431 976 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 UGCGQ16739 394 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 CCDC40Q4G0X9 1142 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 FAM160B1Q5W0V3 765 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 CEP135Q66GS9 1140 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 LAIR1Q6GTX8 287 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 PARM1Q6UWI2 310 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 RSPO2Q6UXX9 243 aaPredicted RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 ZNF280BQ86YH2 543 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 MAP4K3Q8IVH8 894 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 ST13P5Q8NFI4 369 aaPredicted RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 HDAC7Q8WUI4 952 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 SMG7Q92540 1137 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 LPPQ93052 612 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 PPP1R13BQ96KQ4 1090 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 ACCSQ96QU6 501 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 RPS6KC1Q96S38 1066 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 HERC2P3Q9BVR0 1158 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 ZHX3Q9H4I2 956 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 DHX33Q9H6R0 707 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 RXFP1Q9HBX9 757 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 AGPAT3Q9NRZ7 376 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 SEMA4GQ9NTN9 838 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 ZNHIT6Q9NWK9 470 aaKnown RBP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 TBC1D7Q9P0N9 293 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 MYO1AQ9UBC5 1043 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 GABBR1Q9UBS5 961 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 STK39Q9UEW8 545 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 GMEB2Q9UKD1 530 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 EXOC7Q9UPT5 735 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 USP20Q9Y2K6 914 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 LAMA5O15230 3695 aa7.88□□□□□ -1.15
CHRNA7-208ENST00000635978 ATP8B3O60423 1300 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 SSU72P8A0A1W2PR75 194 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 BACH1O14867 736 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 ZNF623O75123 536 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 AKAP3O75969 853 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 DDHD2O94830 711 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 PRPF6O94906 941 aaKnown RBP7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 GLUD1P00367 558 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 SOD2P04179 222 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 RETP07949 1114 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 FGFR4P22455 802 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 NMT1P30419 496 aaKnown RBP7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 AFF1P51825 1210 aaKnown RBP7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 ETF1P62495 437 aaKnown RBP7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 PRKCEQ02156 737 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 UBXN2BQ14CS0 331 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 TARBP2Q15633 366 aaKnown RBP7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 CSRP2Q16527 193 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 SLC44A4Q53GD3 710 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 XKR9Q5GH70 373 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 NOMO2Q5JPE7 1267 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 SWSAP1Q6NVH7 229 aa7.87□□□□□ -1.15
CHRNA7-208ENST00000635978 PRR23CQ6ZRP0 262 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms