RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 MED7O43513 233 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 PQBP1O60828 265 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 NBNO60934 754 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 GJB6O95452 261 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 CTAGE8P0CG41 777 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 VDRP11473 427 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 ATN1P54259 1190 aaPredicted RBP10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 MESDQ14696 234 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 PTPN20Q4JDL3 420 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 DPH6Q7L8W6 267 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 LIMS2Q7Z4I7 341 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 ACOT1Q86TX2 421 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 CTAGE6Q86UF2 777 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 OSTM1Q86WC4 334 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 CTAGE4Q8IX94 777 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 TTC39CQ8N584 583 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 C12orf29Q8N999 325 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 C3orf58Q8NDZ4 430 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 IPO4Q8TEX9 1081 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 RABGGTAQ92696 567 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 HES6Q96HZ4 224 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 MS4A14Q96JA4 679 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 HEXIM2Q96MH2 286 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 PAAF1Q9BRP4 392 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 ZNF518BQ9C0D4 1074 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 DPEP3Q9H4B8 488 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 TJP2Q9UDY2 1190 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 AMFRQ9UKV5 643 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 CASTOR2A6NHX0 329 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 C9IYK1 514 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 PODXLO00592 558 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 DDX3YO15523 660 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 POMCP01189 267 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 CLCNKBP51801 687 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 LILRA4P59901 499 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 C1QTNF8P60827 252 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 CKAP4Q07065 602 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 SGO2Q562F6 1265 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 LIN9Q5TKA1 542 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 PLEKHA7Q6IQ23 1121 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 PPP1R2P3Q6NXS1 205 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 NOA1Q8NC60 698 aaKnown RBP10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 OR6B3Q8NGW1 331 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 GOLGA1Q92805 767 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 PGBD4Q96DM1 585 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 LPIN3Q9BQK8 851 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 PLCD4Q9BRC7 762 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 SEZ6LQ9BYH1 1024 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 LHX5Q9H2C1 402 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 EPC1Q9H2F5 836 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 RGS18Q9NS28 235 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 FAM49BQ9NUQ9 324 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 ANAPC7Q9UJX3 599 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 TSPAN16Q9UKR8 245 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 INPP5FQ9Y2H2 1132 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 ALG6Q9Y672 507 aa10.6□□□□□ -0.71
CACNA1A-216ENST00000635742 TCRBV5S1A1TA0A578 114 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 A8MXQ7 604 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 KCNK3O14649 394 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 CALB1P05937 261 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 HSPA8P11142 646 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 COMTP21964 271 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 LMO2P25791 158 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 MARCKSL1P49006 195 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 GRIK3Q13003 919 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 MAMLD1Q13495 774 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 BFSP2Q13515 415 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 CNGA2Q16280 664 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 TCTN1Q2MV58 587 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 GOLGA7BQ2TAP0 167 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 CYP4A22Q5TCH4 519 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 CTU1Q7Z7A3 348 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 UNC93AQ86WB7 457 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 ADGRF2Q8IZF7 708 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 PDCL2Q8N4E4 241 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 DNAJC5GQ8N7S2 189 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 APPL2Q8NEU8 664 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 DIS3LQ8TF46 1054 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 UBXN4Q92575 508 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 VCPIP1Q96JH7 1222 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 ZNF333Q96JL9 665 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 CALR3Q96L12 384 aaKnown RBP10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 CRISPLD2Q9H0B8 497 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 CEP83Q9Y592 693 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 TET1Q8NFU7 2136 aa10.59□□□□□ -0.71
CACNA1A-216ENST00000635742 CYB561D2O14569 222 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 PFKMP08237 780 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 SKIP12755 728 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 C2orf54Q08AI8 447 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 CCDC142Q17RM4 750 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 PPP1R26Q5T8A7 1209 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 DCAF12L1Q5VU92 463 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 LCLAT1Q6UWP7 414 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 SLC39A5Q6ZMH5 540 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 SLC24A5Q71RS6 500 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 ZNF572Q7Z3I7 529 aaPredicted RBP10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 ERICH1Q86X53 443 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 TOP6BLQ8N6T0 577 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 UBA3Q8TBC4 463 aa10.58□□□□□ -0.72
CACNA1A-216ENST00000635742 KRT35Q92764 455 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms